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Name : rumB (HELO_4092) Accession : YP_003899161.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 3628379 - 3629656 bp Length : 1278 bp Strand : - Note : protein umuC - Escherichia coli (strain K12),InterPro: UMUC-like DNA-repair protein, High confidence in function and specificity DNA sequence : GTGATCTGCCTGTCGGATGCGAATTGCTTTTACGTATCCGCTGAGCGGGTCTTCGACCCACGCTTGCACGGCATCCCAGT GGGTGTGCTCTCCAACAACGACGGCTGTGTCGTTGCCAGGTCACCCGAGCTCAAGGCTCTCGGAGTCGGCATGGGACAGC CGGCGCATGAGATTCCGCCGCCTATCCGTCGGCAGTGTGTGCTGCTCAGTTCCAATTATGCGCTGTATGGGGACATGAGC CGATGGGTGACATCCATCTACACCCAGCACACACCTGACGTTGAGGTGTACTCGATCGACGAGAGCTTTCTCGGGTTCCA TGGTTTTCCCACCGACAGCCTCGAAGAACGCTGCAGGGCGATGCGGCGCCAGGTACTTCGAGACACAGGAATTACGGTGA GCACAGGGCTGAGTACAAGCAAGGTCCTGGCGAAGTTGGCCAACCACCAGACCAAACGCGATCCCGACCGGGATGGGGTG GCCATCTTGTTGCCGAACGCTCCAGAGACTCGGCAGCTCCCCGAGGAGTTGCCGGTGACGGAGGTGTGGGGCGTTGCGGG TCGCATGGCCATCCGGCTGTACGAGCTGGGGATCCAGACGGCCTGGGATCTTCGTGTTGCCGATCCCAAGCGCATCCGAG GCAGAACTTCGGTTGTCATGGAGCGGATCGTCTGGGAGTTGCGTGGCAAAGACTGTATAGAGCTCGACGATATGTCCGCA CCCAAGAAGCAGATCATGACCAGTCGTTCGTTTGGCCGCCTGACGGGCGACCTGGACGACTTGCGTGAGGCCGTACGGGT CCATGCCAGCCGCGGTGCCGAGAAGCTACGTCGACAGGGTAGCTTGACCCGTGCGGTGATGGTGTTCGTGCGCACAAACC CGTTCCGTGAAGATCACCCCCAGCATCGTGACAGCGTGGTAGTAGCGCTGCCCAGCGCGACCGATGACAGTCGCCTGATT GTCACAGCAGCGGCTCGAGGGCTCGAAGCGCTTTATAAGCAAGGATACCGGTACCAAAAGGCAGGGGTCATGTTGATGGA CTTGTGTGACCGTGCTGCAGAGCAGTTGGATCTCATGGCCGAGCCCGAGAATGACGAACAACGGGGGCGTCGTGACCGCT TGATGGCCACCATTGATCAGCTTAACGCCGAGCATGGTCATGGCACGGTCACGCTGGGCATGTCGCGTCCGAGAAGCGCC TGGCGGCTACGGTGTCAGCATCGGACGCCGCGTTACACCACTCGATGGGATGAGTTGCCATCGGTAAACTGTTCATGA Protein sequence : MICLSDANCFYVSAERVFDPRLHGIPVGVLSNNDGCVVARSPELKALGVGMGQPAHEIPPPIRRQCVLLSSNYALYGDMS RWVTSIYTQHTPDVEVYSIDESFLGFHGFPTDSLEERCRAMRRQVLRDTGITVSTGLSTSKVLAKLANHQTKRDPDRDGV AILLPNAPETRQLPEELPVTEVWGVAGRMAIRLYELGIQTAWDLRVADPKRIRGRTSVVMERIVWELRGKDCIELDDMSA PKKQIMTSRSFGRLTGDLDDLREAVRVHASRGAEKLRRQGSLTRAVMVFVRTNPFREDHPQHRDSVVVALPSATDDSRLI VTAAARGLEALYKQGYRYQKAGVMLMDLCDRAAEQLDLMAEPENDEQRGRRDRLMATIDQLNAEHGHGTVTLGMSRPRSA WRLRCQHRTPRYTTRWDELPSVNCS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 8e-56 | 43 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 1e-63 | 41 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 1e-63 | 41 |
