Gene Information

Name : HELO_4081 (HELO_4081)
Accession : YP_003899150.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3611541 - 3612128 bp
Length : 588 bp
Strand : +
Note : protein viviparous homolog - Oryza sativa subsp. japonica (Rice), Hypothetical protein

DNA sequence :
ATGCCTATTGCTTCAAGGAGAACCACCATGACGACGTCAACTCAAGCCCAGACCACCTTCTTCAACCTCCACGTCGAAGG
GGTTGGCTATCTCAACCGCATCCGCACCGTGGATCCGAAACGCGGCGACGCGTTTCTGGCCTGCAACATCAACGCCCTAA
ACGGGCCGGCGGATGACGTCAGCTATACGCGTTTCGATTGCCGTGTAAGCGGCCAGGAAGCGCAGAAACTGGTCCGCAAG
TGCCAGCAAGCCGTGGACATGAAGAAGAAAGTCCTCATCGGCTTCAAACTGGGCGACCTCTGGACGGACACCTTTGTGTA
CCAGAAAGGCGATCGCCAGGGCGAAACCGGTGTCAGCCTCAAAGGCCGGCTACTGCTGGTGAAGTGGATCAAGATCAACG
GCGAGACGGTCTATCAGCGCGAAGCCCCGGCTTCGGACGACACTGACACACCGGCGCCGCAAGCTGACCATGCCACAGCG
ACCCCGTCGCAAGAGGAGCCGGCACCGACTCAGCCCAACGGCTATGCCGCGGCTCAGTCCGGTGAATCGGCCGGCGCTTT
CGAGACGCCGGCGGCTGCCTCATTCTAA

Protein sequence :
MPIASRRTTMTTSTQAQTTFFNLHVEGVGYLNRIRTVDPKRGDAFLACNINALNGPADDVSYTRFDCRVSGQEAQKLVRK
CQQAVDMKKKVLIGFKLGDLWTDTFVYQKGDRQGETGVSLKGRLLLVKWIKINGETVYQREAPASDDTDTPAPQADHATA
TPSQEEPAPTQPNGYAAAQSGESAGAFETPAAASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13415.1 hypothetical protein Not tested PAGI-5 Protein 2e-41 49
PMI2628 YP_002152330.1 hypothetical protein Not tested Not named Protein 5e-31 49
RL074 AAP84199.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-41 49
STY4534 NP_458625.1 hypothetical protein Not tested SPI-7 Protein 3e-28 44
t4235 NP_807837.1 hypothetical protein Not tested SPI-7 Protein 3e-28 44