Gene Information

Name : HELO_4069 (HELO_4069)
Accession : YP_003899138.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3596097 - 3597515 bp
Length : 1419 bp
Strand : +
Note : Protocadherin gamma-A11 precursor - Homo sapiens (Human), Hypothetical protein

DNA sequence :
ATGACACACACCATGACTCGCCTGACGCTGGGCATCAGCCTGGCGGCGGCGGTCAGCACCGCACAGGCGCAAACCGCCTC
GGATGCCCTGTATTACGATATCGGCGGCGCCGCCCCGATCAGCGTCTCCGCGGGGCGGGGCCACTCGCCTTCGGCGCTCA
GCATGGGCGCCAGGTGGAACCTCAACGCCACCTGCGGCAACTTCGACATGGGCGCCTCCGTGTCGAACCAGCTCAACGGC
ATTACCAACGGCTTCCAGAACCTCATGGGTGATGTCGTCCAGAACGCCACCGGGGCGGTGGCGTCGTTGCCCGCCATGGT
GATCCAGCGAGCGAACCCCCAGCTCTATGACCTGCTGCAGAACGGTGTGCTGCAGGGGCGCCTGGACTATGACAAGACCA
AGCTGTCGTGCCAGAACATGGCCGAGCAGATGACCGACTTTGCCATGGGAGAGCAGTCCCAACAGGCTGCCAAGGCAGAG
AATTGGAAGGCTACCGCCAAGAACACCCAGGACCCTGTCGCTGCTCAGGAAGTGGTCGAGGAACAAGGCGGCAACAAGGG
CCGCACCTGGGTCGGCGGTCAAAAGCGCGGAGGGGAAAATCAAGAGCCGATCGAGGTCGTCGAGGATACAGCGATCGCGG
GTTACAACCAGCTGCACGGCCGTAGCGATCCCACCAGCACGCAGTCAGTCTCTGGCGGTGGCCAAGGGTGGGGATCCATA
TCCACCAATGACGGTGACTGGCCGGGGGGCGGCAGTTTCAGTAATGCGGCCTCGGGTGATTGCCAGGGGGGCATGTGCAC
TGTCTGGCAGGATCCCCAGGAGGCCGCTGACTGGACCAAATCCGTGATCGGTGAGACCGAGATCCGGACCTGCGATGGCT
GTGATAAACGACAAGGCCAGGCCGGCACCGGCCTGATGAAAGCCCTCGAGGAGGAACAGACCACCCTGGCCGAGAATCTC
GCTGACCTGGTCAGTGGCAACACGGACCCCACGCCCAGCGCCCTGAATGCGGTGTCCGCTGGCCCGGGCCTGTCCGTCTC
ACGGGGCGTGATCGAAGCGATTCGCAAAGATCCCGATGCTGAACTGCTCACGCAGCGTCTGGCCGGTGAAATGGCGCTGT
CGCGCACCCTCACCAAAGCCATGTGGGCACGCCGCACGCTCCTCGCCGGCGCCAGTGAGCCAGGCATCGCCAACAATGAA
GAAGGCATGACCGAACTCGAGCGCAAGCTCACGCACCTCGATCGCGATATCGACGCGCTCAAGAGCGAGCTGGAAGTCCG
CACCGCGTTGGCCAACAACGCCGCCCAGCTGGCCCTCCAGCGTGTGGCGCAGCGTCGGGCCAATACCAGTGCCCCAGGCG
TCAACCTGCCCGAATCCCGTCGCGACAACCGCGGCCGTCCGTCTGAGGAGGCCAATTAA

Protein sequence :
MTHTMTRLTLGISLAAAVSTAQAQTASDALYYDIGGAAPISVSAGRGHSPSALSMGARWNLNATCGNFDMGASVSNQLNG
ITNGFQNLMGDVVQNATGAVASLPAMVIQRANPQLYDLLQNGVLQGRLDYDKTKLSCQNMAEQMTDFAMGEQSQQAAKAE
NWKATAKNTQDPVAAQEVVEEQGGNKGRTWVGGQKRGGENQEPIEVVEDTAIAGYNQLHGRSDPTSTQSVSGGGQGWGSI
STNDGDWPGGGSFSNAASGDCQGGMCTVWQDPQEAADWTKSVIGETEIRTCDGCDKRQGQAGTGLMKALEEEQTTLAENL
ADLVSGNTDPTPSALNAVSAGPGLSVSRGVIEAIRKDPDAELLTQRLAGEMALSRTLTKAMWARRTLLAGASEPGIANNE
EGMTELERKLTHLDRDIDALKSELEVRTALANNAAQLALQRVAQRRANTSAPGVNLPESRRDNRGRPSEEAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 7e-67 41
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 5e-66 41
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 7e-67 41
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-64 41
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-64 41