Gene Information

Name : HELO_4059 (HELO_4059)
Accession : YP_003899128.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3584591 - 3585079 bp
Length : 489 bp
Strand : +
Note : Alginate biosynthesis protein algK precursor -Pseudomonas syringae pv. tomato, Hypothetical protein

DNA sequence :
ATGGCCACTCTCAAGCACCAACCTATGCCCTGCCGTAGGGCCCGCCGGGCGGGCCTGTTGGGGCTCAGCCTGGCCATCAT
GGTGGGACTGAGCGGCTGCGCCACCTCCAAGGACGAGCTCATGCCCCATGGTGACACCACCATGAAGGAGCTCTGGCAAG
GTGGCGCCGCCTCGGGCGGCGAGAGCCTGACCCAGCAGGGGCTGTTGGATGCCCGCAGCACGCTGCGTCGTGAGGTCAGT
GATGGCGCGATGGTGGATCAGCGCGTGCACTACACCCGTACCGCCGCTAACGAGATCTATAACCGGTTCGCCCGGCTGCC
CAATCCGGACATCGTGATGTACGTCTACCCGCACCTCGCCGGCGGCGAGGTGCCGGTGCCGGGTTACTCCACGGTGTTTT
CGCTATACCGCAAGCCGCAGTACGCCATGCCCGGCGAGACGGCCCGGCCGTCCGTCGAACGGGCGCAACAGCGGAGGGCG
GCACGATGA

Protein sequence :
MATLKHQPMPCRRARRAGLLGLSLAIMVGLSGCATSKDELMPHGDTTMKELWQGGAASGGESLTQQGLLDARSTLRREVS
DGAMVDQRVHYTRTAANEIYNRFARLPNPDIVMYVYPHLAGGEVPVPGYSTVFSLYRKPQYAMPGETARPSVERAQQRRA
AR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-27 56
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 6e-32 55
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-30 54
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-30 53
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-27 52
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 4e-29 51
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 4e-29 51
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 2e-26 48
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 2e-24 47
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 6e-25 47
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 5e-19 46
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 4e-22 46