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Name : HELO_4058 (HELO_4058) Accession : YP_003899127.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG1322 EC number : - Position : 3583147 - 3584628 bp Length : 1482 bp Strand : + Note : Pleckstrin homology-like domain family B member 1 -Rattus norvegicus (Rat), High confidence in function and specificity DNA sequence : ATGGCACCACTGAAGAGCAACGGCTTGTTGAAGGTCCTGGTCCCCGGGGCGCTCGTCCTGGTCATCCTGATTGTCGTCAT GGCCCTGGGCGGTGGCGACGGTGACGACTCGGGAGGTGAAGACGAGGCCACGGATCCGTCACTGGTCCTGACCGATGAAG AAAAAACCGCCCTGGGCATCGAGGCGGACACCCCGCGTGACACGGTGGCGACCCTGGTCGGTCAGCTGCGGCAGACCAAC GCCGAAATGCAGCAGATGCGGGAAGAAAGTGCACAACTTCGCGAGCAGAACGAACGCCTCGCCGAGCGCGCCCGCAATGT CGACCAACAGGTCGCAGCGGCGATGCGCGAAGAACGTGAACGCCACCGATCGCAGCTGAACCAGCAATCCAATGAACAGC AATCCGTGCTGGGCACCCTGAAACGTCAGATCAACCAACTGCAGGGCCAACTGGATACGTCGGGTTCCGAGGACGACGTC CCGGTGGGCCTCGGGCTGGAAGGCGGAGGTGCCGGTACCAGTGGCGGCCAACTCGCCTGGGTGGAGCCTCTTGACGCCGC TCCTACGGATAGCCGGGGACGTCGGTCCAATGACGAAGGTCCGGTGTTTCCGACATCGTTCGGTGAGGCCTCGGACGCCG TGAGCGACTCGGCCACCCGTGCCGCCACAGCAATCGAAGCCAAGGCCACCGGGGAGCCGGATGCCTCGACCGTCGAACCC GTCTACACCGTGCCGGAGAACTCGACCCTGATGGGTTCGCTGGGCATGACGGCGTTGATCGGCCGAGTACCGATCAACGG CACCGTCAATGATCCCTATCCCTTCAAAGCCGTGATTGGCCAGGACAATCTCACGGCCAATGGCATCGAGATCCCCGAAC TGGAAGCCGCCGTGGTCAGTGGTACAGCCACGGGCGATTGGACGCTGTCCTGTGTGCGCGGAAATATCGACAGCATGACC TTCGTGTTCCAGGACGGCACCATCCGCACCGTCCCCACCCCGGAGGACGTCAACAGTGGTGGCGGCGGCAGCAGCCGCCA GAGTGGTGACACCACCATCGGCGGGGGTGACTCGATCGGCTGGATCAGCGATGCCTATGGCACGCCCTGTGTGACCGGCG AACGCCGCTCCAACGCCCAGGAGTATCTGGGCACCCAGTCGTTGCTGACCGCCGCCGGCGCCGGTGTGGCCTCCACGCTC TCCGACGATGACAGCACGTCCTTCACCACCATGGGCCCCGATGGCTCCGTGACGCAGGCCATGAGCGGCAACCAGGCCGT CGGCCAGATCCTGACGCAGGGCGTCAATGACATGAGCAACTGGGTGAACCAGCTGTATGGCCAGGCCTTCGCGGCGGTGT ATGTCCCGCCGGGCCAGGAAGTGGCCATCCACATCACCAAGCAGCTGCCGATCGACTTCGAGACCGAAGGGAGGAAAGTC CACTATGGCCACTCTCAAGCACCAACCTATGCCCTGCCGTAG Protein sequence : MAPLKSNGLLKVLVPGALVLVILIVVMALGGGDGDDSGGEDEATDPSLVLTDEEKTALGIEADTPRDTVATLVGQLRQTN AEMQQMREESAQLREQNERLAERARNVDQQVAAAMREERERHRSQLNQQSNEQQSVLGTLKRQINQLQGQLDTSGSEDDV PVGLGLEGGGAGTSGGQLAWVEPLDAAPTDSRGRRSNDEGPVFPTSFGEASDAVSDSATRAATAIEAKATGEPDASTVEP VYTVPENSTLMGSLGMTALIGRVPINGTVNDPYPFKAVIGQDNLTANGIEIPELEAAVVSGTATGDWTLSCVRGNIDSMT FVFQDGTIRTVPTPEDVNSGGGGSSRQSGDTTIGGGDSIGWISDAYGTPCVTGERRSNAQEYLGTQSLLTAAGAGVASTL SDDDSTSFTTMGPDGSVTQAMSGNQAVGQILTQGVNDMSNWVNQLYGQAFAAVYVPPGQEVAIHITKQLPIDFETEGRKV HYGHSQAPTYALP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C49 | AAN62143.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 9e-85 | 51 |
| ORF SG59 | AAN62281.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-71 | 50 |
| pph82 | CAI36123.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 2e-76 | 46 |
| EXA35 | ABD94644.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-74 | 45 |
| unnamed | ABR13364.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-73 | 44 |
| RL024 | AAP84151.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 3e-73 | 44 |
| t4268 | NP_807865.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-62 | 43 |
| STY4570 | NP_458655.1 | putative exported protein | Not tested | SPI-7 | Protein | 2e-61 | 42 |
| PMI2579 | YP_002152298.1 | hypothetical protein | Not tested | Not named | Protein | 2e-66 | 42 |
