Gene Information

Name : HELO_4057 (HELO_4057)
Accession : YP_003899126.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3582320 - 3583141 bp
Length : 822 bp
Strand : +
Note : DNA-directed RNA polymerase subunit beta -acidothermus cellulolyticus (strain ATCC 43068 / 11B), Hypothetical protein

DNA sequence :
ATGAAGCCGATCATCAAGCTGGGGGTTGTCCTGGGCGGCTGCCTGCTGTCACTGAACGCCGCGGCGGTACAGATCATGGA
GTGGGACCACCGACCGCTGGACATCGAGCTTCCGGTGGAGGCGGAACGCCTGGTGATCCTGGACCGCAATGTCAAAGTCG
GGCTGCCCAGGCCTATCGCGAACCCCGAGACGTTGCGGGTGCAAAGTACCGGCGGCGTGCTGTACCTCAAAGCCAACGAG
CCCTTCGATACGCAACGTGTCCAGCTCAAGGATGCCGAGTCGGGTGAGTTGTTGCTGGTCGACTTGACCGCCACCGACGA
CGCCAGCCACGAAGACATCAAGGTCGTGGACGCCGAATCATCGGATGATGCCGAGACGTCAGGGTCGCCGAAAGACGGTC
GCAGTGAGGGTGACGCCGACGAACCGGAGGTTCGCTCACCAGTGCCGGTGACGCTGATCCGTCACGCGGCGCAGTCCCTC
TATGCCCCCTTGCGCACCGTCGAGGCAATTCCCGGCGTCAAGCGGGTACCTATGCGCCTGCCGGACACCCTGCCGGGGCT
GATGCCCGCCTTGCCGGTCGAGGCGACCCCGAAAGCGGCCTGGGGCGTCGATGGCTGGACGGTCACCGCCGTGCGACTCA
TCAACCAGGACCCGTCGCGGGAATTCGAGCTGGATCCTCGCTGGCTTCAGGGCCGCTTCTACAGTGCCAGCTTCATGCAC
CCGACCCTGGGTCGCAAGGGGAGCGAGACGGCCGCGACCACGGTCTTTCTGGTCACCCGTCAGGGCGGTCTGCGTGACGC
TCTGGCGCGTCAGGGGAGGTAA

Protein sequence :
MKPIIKLGVVLGGCLLSLNAAAVQIMEWDHRPLDIELPVEAERLVILDRNVKVGLPRPIANPETLRVQSTGGVLYLKANE
PFDTQRVQLKDAESGELLLVDLTATDDASHEDIKVVDAESSDDAETSGSPKDGRSEGDADEPEVRSPVPVTLIRHAAQSL
YAPLRTVEAIPGVKRVPMRLPDTLPGLMPALPVEATPKAAWGVDGWTVTAVRLINQDPSREFELDPRWLQGRFYSASFMH
PTLGRKGSETAATTVFLVTRQGGLRDALARQGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-42 45
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 8e-42 44
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-42 44
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 2e-41 43
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 4e-36 43
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-32 42
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-41 42
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 5e-36 42
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 5e-36 42
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-39 42