Gene Information

Name : HELO_4047 (HELO_4047)
Accession : YP_003899116.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3574478 - 3575026 bp
Length : 549 bp
Strand : +
Note : S-adenosylmethionine:tRNA ribosyltransferase-isomerase - Vibrio parahaemolyticus, Specificity unclear

DNA sequence :
ATGAACCCCATCACTGTCTGGATAGGACTGCTGGGACTGAGCGTGAGCCTGACCGCCCAGGCGCAGGCGCCCGGCGTCTC
CCCGCTCGAGGTCGTAGCCGATCACGGCGGCGAGCCGGCACGTCCCTATTACGTCGCCATCGGCGCCGCCCAGGTGGAGG
AACGCGAGGGCTATCACGCCAATGTGGTCGGCCAGGCCGGACAAGCGGCCCCGGTGACCGATGCCCACTGGTTGCCGGTG
GAAAGCGAGCGCCTGTCACCCGGCAACGTCGAGGCCCGCGAGCTCGAGCTTCACGCCGGCATGACACCGTTTTTCCTGGT
CGGTGACGACCCCTTGTCACTGAAGTGGCTCAAGGCGCGGCGTGACTGGCTGGTCGAGCATCATGCCGTGGGTCTGGTGG
TCGATGTGGCGGATACCGCCGGCCTCGAGCGCCTACGCCAACGCGCCCGGGGACTGGAGCTGCGCCCCACCTCGGGCGAC
GACATCGCCGCACGCCTCGGCCTGAATCACTACCCGGTGGCCATCACCCCCCAAGGATTGAGTCAGTAA

Protein sequence :
MNPITVWIGLLGLSVSLTAQAQAPGVSPLEVVADHGGEPARPYYVAIGAAQVEEREGYHANVVGQAGQAAPVTDAHWLPV
ESERLSPGNVEARELELHAGMTPFFLVGDDPLSLKWLKARRDWLVEHHAVGLVVDVADTAGLERLRQRARGLELRPTSGD
DIAARLGLNHYPVAITPQGLSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4258 NP_807856.1 hypothetical protein Not tested SPI-7 Protein 2e-26 47
STY4560 NP_458646.1 hypothetical protein Not tested SPI-7 Protein 2e-26 47
ORF SG69 AAN62291.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-23 45
ORF C66 AAN62160.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-22 44
EXA49 ABD94658.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-20 42
PMI2590 YP_002152309.1 hypothetical protein Not tested Not named Protein 3e-20 42
RL049 AAP84176.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-19 41
unnamed ABR13377.1 hypothetical protein Not tested PAGI-5 Protein 4e-20 41
pph71 CAI36112.1 hypothetical protein Not tested PPHGI-1 Protein 8e-20 41