|
Name : dnaB (HELO_4022) Accession : YP_003899091.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3549933 - 3551336 bp Length : 1404 bp Strand : + Note : Replicative DNA helicase - Salmonella typhi,InterPro: DnaB helicase, High confidence in function and specificity DNA sequence : ATGCCCACTGAAGCCCCTATCGCACAGGATGTCGTGCCCCAGATCGGCTACCAGTTGCCGCACAGCCTCGAGGCCGAGCA GTCCGTGATCGGTGGCCTCATGCTCGACAACCGCGCCTGGGACGACATCGCCGATCGTCTCGATGGCGGCATGTTCTATC GGCCTGAACACCGCCACATCTTCGAGGCAATGCGCGACCTCATCGCCCAGGAGGCACCGATCGATGTCGTGACGCTGTCG GAGGCGCTCGAGCAACACAATCGTCTGGAGACGATCGGCGGCCTGAACTATCTCGCCGAGATTGCCCGACACACGCCGAG TGCCGCCAATATCACCGCCTACGCTGATATCGTCCGGGATCGCTACCAGTTGCGGCAACTGTCGCAGACGGCGGTGGCGC TCAACCGGCAGGCGCTCGATGCACAGGGACGTAGCGCAACCTCGATCATCGAGGCCGCCGAACAACAACTGTTCGAGCTC GTCGATGACCGCCGGCAAGCCCAGGGCTCTGTCAGGGAAATCCTGGAGGAAGTGATCGACCGCATCGACATCGCGTCCCA GTCGGACGGCGGCATCACCGGCGTGCCAACAGGCTTCACCGACGTCGACCGGATGACCACCGGTCTGCAGCCCGCCGACC TGGTGATCCTCGCCGGGCGCCCTTCCATGGGCAAGAGCGCCCTGGGCATGGGCATCACCGAGAACGTCCTGGCGTCGACG GCCACCCAGGCACAAGGCCCGGTGATCGTCTTCTCGCTGGAAATGCCCCGCGAGGACCTCATGCTCCGCCTGCTGGCCAG TATCGGCCGACTCCCCCTGCAGGCCTTGCGATCCGGCCAGCTCGAGGACGACCAATGGCCGACTCTGGCCGCGGCAGTCG CCAAGGCGAGGGACTTCGAGAACCGTCTGTTCATCGATGATGAAGGCGGACTCCATGCCTCGACCCTGAAGACCCGCGCA CGGCGTATTGCCCGTAAGCACGGTCGTCCCGCACTGATTCTGGTGGACTACCTGCAGATGCTCACCGAGCCAAGTGCCGG TGGTGAGAACCGCAACCTAGAGATCAGTGCCATCAGCCGGATCCTGAAAGCCACCGCCAAGGAGCTGAGCTGTCCCCTCA TTGCCCTTTCCCAGCTCAACCGCCAGTTGGAAAACCGCCCGAACAAGAGACCGACCATGGCCGACCTCCGGGACTCGGGC TCGCTCGAGCAAGATGCCGATCTCATCGGCTTCGTCTACCGCGACGAGGTTTACCACCCCGACAATCCCGAGAACCACGG CCTGGCCGAGCTCATCCTGGGCAAACAGCGCAACGGGCCAACCGGCACCGTCCATCTTGCATGGCTCGATGAACAGACCC GGTTCGAGAACCTCGAGTGGAAACACCGGGAGGTGCTGTCATGA Protein sequence : MPTEAPIAQDVVPQIGYQLPHSLEAEQSVIGGLMLDNRAWDDIADRLDGGMFYRPEHRHIFEAMRDLIAQEAPIDVVTLS EALEQHNRLETIGGLNYLAEIARHTPSAANITAYADIVRDRYQLRQLSQTAVALNRQALDAQGRSATSIIEAAEQQLFEL VDDRRQAQGSVREILEEVIDRIDIASQSDGGITGVPTGFTDVDRMTTGLQPADLVILAGRPSMGKSALGMGITENVLAST ATQAQGPVIVFSLEMPREDLMLRLLASIGRLPLQALRSGQLEDDQWPTLAAAVAKARDFENRLFIDDEGGLHASTLKTRA RRIARKHGRPALILVDYLQMLTEPSAGGENRNLEISAISRILKATAKELSCPLIALSQLNRQLENRPNKRPTMADLRDSG SLEQDADLIGFVYRDEVYHPDNPENHGLAELILGKQRNGPTGTVHLAWLDEQTRFENLEWKHREVLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-98 | 51 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-105 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-92 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-93 | 48 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-93 | 48 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-90 | 46 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-88 | 46 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-88 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-76 | 42 |
