Gene Information

Name : aldH (HELO_3918)
Accession : YP_003898987.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 3426284 - 3427840 bp
Length : 1557 bp
Strand : -
Note : Retinal dehydrogenase 1 - Homo sapiens (Human),InterPro: aldehyde dehydrogenase, High confidence in function and specificity

DNA sequence :
ATGACCCGATCCGAGACGCCGATTCTCGCCACCGAGGCGCCCGAAACCCATGCCGACTGGCGGGCGCTGGCCGAGCGCCT
GCGAACCGAGCGGGGGCTCGAGACCCGTGCCTATGTCGACGATGCCTTCGTCGCGGCCATTGGCGGCGAGACCTTCACCA
CCGCCAATCCGGCCACCGGCGAGCCGCTCGCCGAGGTGGCCAGTTGTGACGCCGCCGATGCCGAAGCGGCGGTGGCCGTG
GCCCGCCGCGCCTTCGACGGCGGCGAGTGGTCGCGGCGCGCGCCGGGCGAACGCAAGGCCGTGCTGCTGCGCCTGGCCGA
ACTGATGGAGGCGCACCGCCACGAGCTGGCGCTGCTCGACAGCCTGGACATGGGCAAGCCGGTATCGAGCGCCATGGGCG
ACATGGCCGGCGCCATCGGCTGCATTCGCCATCATGCCGAGTCCATCGACAAGCTCTACGGCGAAATCGCCCCCACCGGC
GAGGATAGCCTGGGCCTGGTGATGCGCGAGCCGCTGGGCGTGGTGGCCTCCATCGTGCCCTGGAACTTCCCGATGATGAT
GACTGCCTGGAAGATCGGCCCGGCTCTCGCCGCCGGCAACAGCGTCATCCTCAAGCCCTCGGAGAAGTCGCCGCTCTCGG
CGCTGCGCCTGGCGCAGCTGACTCGCGAGGCCGGGCTGCCGCGCGGCGTCTTCCAGGTGCTGCCGGGCTTCGGTCATACC
GTGGGCAAGGCGCTGGCGCTGTCCATGGAGGTCGACTGCCTGGCCTTCACCGGTTCCACCGGGGTCGGCAAGCAGCTGAT
GCAGTACGCCGGCCAGTCGAACCTCAAGAAGGTCTTCCTGGAGTGCGGCGGCAAGAGCCCGAACCTGATCTTCGCCGACT
GCAAGGACCTGGATCGGGTGGCCGAGCATGCCGCCGCGGCGATCTTCCACAACCAGGGCGAGGTGTGCATCGCCGGCTCG
CGGTTGCTGGTCGAGAATTCGATCCGCGAGGCCTTCGTCGACAAGGTGCTGGCCGCCGCCGAGCGCATGCAGCCCGGCGA
CCCGCTGGACCCGGCCAGCTTCATGGGCGCGATCGTCGATGAAACGCAGCATGCCCGCATCCTGGAATATATCCGCCGGG
GCGTCGAAGAAGGCGCGACCCTGCGCACCGGTGGCCGGGCGCTGGACGGCGAGGCGCAGAATGGCAAGGGGCTGTTCATC
GCCCCGACGGTGTTCGACGGCGTTACCGACCGTATGGCCATCGGCCGCGAGGAGATCTTCGGCCCGGTACTGGCGGTGTT
CGGCTTCGACACCGAGGAAGAGGCCGTGCGTCTGGCCAACGACAGCGACTACGGCCTGGCGGCGGGGCTGTGGAGCCAGG
ACATCGACCGCATCATGCGGGTGACGCGGCGGCTGCGTTCGGGCCAGGTGTTCGTCAACAACTGGGCGGACATGGACCAG
ACGGTGCCCTTCGGCGGCGTCAAGCAGTCGGGCAACGGCCGCGACAAGTCGCACCACTCGCTGGAGGAGTACTCCGACCT
CAAGGCCGTCTGGATGTCGCTGACTCCCGCGCCCTGA

Protein sequence :
MTRSETPILATEAPETHADWRALAERLRTERGLETRAYVDDAFVAAIGGETFTTANPATGEPLAEVASCDAADAEAAVAV
ARRAFDGGEWSRRAPGERKAVLLRLAELMEAHRHELALLDSLDMGKPVSSAMGDMAGAIGCIRHHAESIDKLYGEIAPTG
EDSLGLVMREPLGVVASIVPWNFPMMMTAWKIGPALAAGNSVILKPSEKSPLSALRLAQLTREAGLPRGVFQVLPGFGHT
VGKALALSMEVDCLAFTGSTGVGKQLMQYAGQSNLKKVFLECGGKSPNLIFADCKDLDRVAEHAAAAIFHNQGEVCIAGS
RLLVENSIREAFVDKVLAAAERMQPGDPLDPASFMGAIVDETQHARILEYIRRGVEEGATLRTGGRALDGEAQNGKGLFI
APTVFDGVTDRMAIGREEIFGPVLAVFGFDTEEEAVRLANDSDYGLAAGLWSQDIDRIMRVTRRLRSGQVFVNNWADMDQ
TVPFGGVKQSGNGRDKSHHSLEEYSDLKAVWMSLTPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-112 53
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-72 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-69 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-69 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-69 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-69 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH YP_003898987.1 aldehyde dehydrogenase VFG0082 Protein 9e-70 41