|
Name : HELO_3849 (HELO_3849) Accession : YP_003898918.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3341758 - 3343356 bp Length : 1599 bp Strand : + Note : contains 2 ATP-binding domains DNA sequence : ATGAGCGACACCCTGCTCGAGATCGACAACCTGAGCGTCGACTTCCAGCTTCCCGATGGCACCGTCCCGGCGGTCAAGGA CGTGAGCTTCGACATCCGTGCCGGTGAGACGGTGGCGCTGGTCGGCGAATCCGGCTCCGGCAAGTCGGTCTCCTCCACCG CCGCCATGCGCCTGCTGCCCGAGCTGGCCCAGGCCCGCGGCGCGATCCGCTTCCGCGGCGAGGATCTGCTTGCCGCCACG CCGCGCCGCATGCGACGCATCCGCGGCAATGCCATCTCGATGATCTTCCAGGAGCCGATGACCTCGCTCAATCCGCTGCA CCGGATCGGCGCCCAGATCATCGAGGTCCTGACCCGGCACAACAAGGCCAAGGGCCGGGCGGCCCGCACCCGGGCCATCG AGCTGCTGGAACAGGTCGGCATTCCCGAGCCCGAGCGACGCATCGGCAGCTATCCCCACGAACTCTCCGGCGGCCAGCGC CAGCGGGTGATGATCGCCATGGCACTGGCCTGCGAGCCGGAACTGCTGATCGCCGACGAGCCCACCACGGCCCTGGATGT CACGGTCCAGGCGCAGATCCTGCAACTGCTCAAGTCGCTGCAGGCGCGTTATGGCATGGCGATCCTGTTCATCACCCATG ACCTGGGTATCGTGCGCCACTTCGCCGACCGGGTCTGCGTGATGCGGCGCGGCGAGATGGTCGAACGCGGCGACACCGCC GAGGTCTTCACCAATCCCCGCCACGACTACACGCGCATGCTGATCGACGCCGAGCCGCGCGGCGGCAAGTCGCCGGTCGA GGCCAGCGCGCCGGTCCTGCTGGAAGCGCGAAACCTGCGCGTCCGCTTCGCTCTCAAGAAGCGCCTGTTCCGGCCCAGCT CGTACTTCGAGGCGGTACGCGGCATCGACCTGACCATCCAGCGTGGCCAGACCGTCGGCGTGGTCGGCGAATCCGGCTCC GGCAAGTCGACGCTCGGCCGCGCCCTGCTGCGCCTGCTCAAGAGCAGCGGCGACATCCGCTTCGACGACAGCGACCTCAC CGCCCTGGATGGCGCCGGCATGCGCCCGCTGCGTTCGCGCCTGCAGGTCGTCTTCCAGGATCCCTTCGGCTCGCTCTCGC CACGCCTGACCGTCGGTGAGGTCATCAGCGAAGGGCTACGCGTCCATCACCCGGAACTCGACCGGCGCCAGCGCGAACGC CGGGTCATCGAGGCCCTGGAGGAAGTGGCGCTCGACCCGGCCATGCGCAACCGCTATCCCCACGAGTTTTCCGGCGGCCA GCGTCAGCGCATCGCCATCGCTCGCGCCCTGGTGCTCAAACCGGAGTTCCTGCTGCTCGACGAACCGACCTCGGCACTCG ACCGTTCCGTGCAGGTCACGGTGATCGAACTGCTGCGTAATCTCCAGGCGAAATACGGCCTGACCTACCTGTTCATCAGC CACGACCTCGCGGTGGTACGCGCCCTGGCCGATACCGTGATGGTGATGAAATCTGGCCAGGTCGTCGAACAGGGACCGAC CGAGGCGATCTTCGCCAACCCGCGCGAAGCCTATACCCGGGAACTGATGCGGGCGGCCTTCGTCGACGACGCCGCCTGA Protein sequence : MSDTLLEIDNLSVDFQLPDGTVPAVKDVSFDIRAGETVALVGESGSGKSVSSTAAMRLLPELAQARGAIRFRGEDLLAAT PRRMRRIRGNAISMIFQEPMTSLNPLHRIGAQIIEVLTRHNKAKGRAARTRAIELLEQVGIPEPERRIGSYPHELSGGQR QRVMIAMALACEPELLIADEPTTALDVTVQAQILQLLKSLQARYGMAILFITHDLGIVRHFADRVCVMRRGEMVERGDTA EVFTNPRHDYTRMLIDAEPRGGKSPVEASAPVLLEARNLRVRFALKKRLFRPSSYFEAVRGIDLTIQRGQTVGVVGESGS GKSTLGRALLRLLKSSGDIRFDDSDLTALDGAGMRPLRSRLQVVFQDPFGSLSPRLTVGEVISEGLRVHHPELDRRQRER RVIEALEEVALDPAMRNRYPHEFSGGQRQRIAIARALVLKPEFLLLDEPTSALDRSVQVTVIELLRNLQAKYGLTYLFIS HDLAVVRALADTVMVMKSGQVVEQGPTEAIFANPREAYTRELMRAAFVDDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-81 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-81 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-81 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-81 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-91 | 43 |
