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Name : lysS (HELO_3843) Accession : YP_003898912.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3333415 - 3334968 bp Length : 1554 bp Strand : - Note : Lysyl-tRNA synthetase - Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768),InterPro: Lysyl-tRNA synthetase class-2, High confidence in function and specificity DNA sequence : ATGGCCCACCAGGACAATTCGCAAGCCCCTGCGGGGACCCAGGACGAGAATCACCTGATCGCGGAACGACGGGCCAAGCT GGCCGCGCGCCGTGAGCAGGCCGCCGCCAGCGGTGGCAGCGCCTTCCCCAATGACTTCCGCCGCGACAGCCTCGCCGCCG AACTGGCCGCCGAACTGGGCGACAAGGACAAGGCCGAGCTCGAGTCGCTAGGGCGGCCGGCCGCCGTGGCGGGGCGGATC CTGCGCAAGCGCGGGCCCTTCATCGTCATCCAGGACGCCTCCGGCCAGATCCAGCTCTACGTCGACAAGAAGGGGCTGCC CGCCGAGACCCTCGAGGACATCAAGGGCTGGGACATCGGCGACATCGTGGCCGGCCGCGGCCCGGTGCACAAGTCGGGCA AGGGCGATCTCTATGTGATGATGGAAGAGGCGCGCCTGCTGACCAAGAGCCTGCGGCCGCTGCCCGACAAGTTCCATGGC CTGACCGACATGGAAGCCCGCTATCGTCAGCGCTACGTCGACCTGATCATGAACCCCGACTCGCGTCGGGTCTTCGAGAC GCGCGCCGGCGTGATCAGCGCCATGCGTCGCTTCTTCGAGGATCACGGCTTCATGGAAGTCGAGACGCCGATGCTGCAGC CGATTCCCGGCGGCGCGACGGCCCGGCCCTTCATCACCCATCACAATGCGCTGGACATCGACATGTACCTGCGCATCGCC CCGGAGCTCTACCTCAAGCGCCTGGTGGTGGGAGGCTTCGAGAAGGTCTTCGAGATCAACCGCAATTTCCGCAACGAGGG GCTGTCCACGCGTCACAACCCTGAGTTCACCATGGTCGAGTACTACCAGGCCTACGCGGATTATCAGGATCTCATGGACT TCACCGAGGCCATGCTGCGTACCGTGACCCGTGAAGTGCTGGGCGATACCACCGTGGTCAGCACCGTGCGTGACAGCGAG GGCGAAGTGCTCGAAACCTTCGAGTACGACTTCGGCAAGCCGTTCGAGCGCCTCAGCGTGTTCGACGCCATCCTGGCCTA CAACCCGGATATCACCGCCGAGGCACTGGCCGACGAGGCCGCGGCGCGGCAGATCGCCGAGCGCCTGGATATCGACGTCA AGGATGGCTGGGGGCTCGGCAAGGTCCAGATCGAGATCTTCGAGAAGACCGTCGAGCATCGTCTCCAGCAGCCGACCTTC ATCATCGACTATCCCACCGAGGTCAGCCCGCTGGCGCGCCGCAAGGATACCGATCCCTTCGTCACCGAGCGCTTCGAGTT CTTCGTCGGCGGTCGCGAACTGGCCAATGGTTTCTCCGAGCTCAATGATGCCGAGGACCAGGCCGAGCGCTTCGCCGCCC AGGCCGCGGAGAAGGACGCCGGCGACCAGGAGGCCATGTACTACGATGCCGACTACGTGCGCGCCCTGGAGTACGGCCTT CCGCCCACGGCGGGCGAGGGCATCGGCATCGACCGCCTGGTGATGCTGCTCACCGACAGCGCCTCGATCCGTGATGTGCT GTTGTTCCCGGCCATGCGGCCTTCCGCGGACTGA Protein sequence : MAHQDNSQAPAGTQDENHLIAERRAKLAARREQAAASGGSAFPNDFRRDSLAAELAAELGDKDKAELESLGRPAAVAGRI LRKRGPFIVIQDASGQIQLYVDKKGLPAETLEDIKGWDIGDIVAGRGPVHKSGKGDLYVMMEEARLLTKSLRPLPDKFHG LTDMEARYRQRYVDLIMNPDSRRVFETRAGVISAMRRFFEDHGFMEVETPMLQPIPGGATARPFITHHNALDIDMYLRIA PELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEYYQAYADYQDLMDFTEAMLRTVTREVLGDTTVVSTVRDSE GEVLETFEYDFGKPFERLSVFDAILAYNPDITAEALADEAAARQIAERLDIDVKDGWGLGKVQIEIFEKTVEHRLQQPTF IIDYPTEVSPLARRKDTDPFVTERFEFFVGGRELANGFSELNDAEDQAERFAAQAAEKDAGDQEAMYYDADYVRALEYGL PPTAGEGIGIDRLVMLLTDSASIRDVLLFPAMRPSAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-134 | 58 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-84 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003898912.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-134 | 58 |
