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Name : dnaB (HELO_3522) Accession : YP_003898591.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2960909 - 2962297 bp Length : 1389 bp Strand : - Note : Replicative DNA helicase - Escherichia coli (strain K12),InterPro: DnaB helicase, High confidence in function and specificity DNA sequence : ATGAATGAATCCCTCGAGCTCGACAAGGAAACCGCGGCGCTCAAGGTGCCGCCTCATTCGCTGGAGGCCGAACAGTCGGT GCTCGGCGGCCTGATGCTCGATAACGCCGCCTGGGACAATGTCGCCGATCGGCTGGTGGCGGATGATTTCTACCGTTACG AACATCGCCTGATCTTCAACGTCATGGGCCAGCTTGCCGAGGAAGCTCGTCCCATGGACGTGGTGACGCTGTCGGAGGCG CTGGAAGGTCGCGACCAGCTTGATACCGTGGGCGGCCTGGCCTATCTGGCGGAGCTGGCGCGCAATACGCCTTCGGCGAG CAATATCCGCGCCTATGCCGATATCGTTCGCGAGCGGGCCACCCTGCGCAAGCTGATCCGCGCCGCCAATCAGGTGGCGG AAAGTGCCTTCGCGCCTCAGGGGCGTCCTGCCGACGAGCTCGTCAACGAGGCCGAGCGACTGGTCTTCCAGATCAGCGAG GAAAGGCCCAAGTCCGGTGGTCCCATCGGCATGAGCGATCTGCTGGCCAAGGCCGTGGACCGTATCGACGAGCTGTTCAA CATGCAGGGCGAGATGACCGGTCTGTCCACCGGCTTCCGTGATCTCGACGACATGACGTCCGGCCTGCAGCCGTCCGACC TGGTGATCATTGCCGGACGACCCTCGATGGGCAAGACCACCTTCGCCATGAACCTGGTCGAGCATGCGGTGATTTCCAGC GACCAGCCGGTGATGGTGTTCTCCATGGAGATGCCCGCGGAGGCATTGATGCTGAGGATGCTGTCGTCCCTCGGACGCAT CGACCAGACACGGGTGCGTACCGGCCAGCTGGAGGACGAGGACTGGCCACGGCTCACCTCGGCGGTGAACCTGCTCAAGG ACAAGAAGCTGTTCATCGACGACACGGCGGCTTTGTCACCCAACGAGATGCGCTCGCGCATCCGGCGGGTGGTGCGCGAG CACGGCAACCTGTCGTTGATCATGATCGACTACCTGCAGTTGATGCAGATTCCCGGCTACTCCGAGAATCGCACCGGCGA GATCTCGGAGATATCGCGCTCGATGAAGGGCCTGGCCAAGGAATTCGGTTGTCCGGTGGTGTGTCTCTCCCAGCTCAACC GCTCCCTGGAGCAGCGGCCCAACAAACGTCCGGTGATGTCGGACCTGCGCGAGTCGGGCGCCATCGAGCAGGATGCCGAT ATCATCGGTTTCGTTTACCGCGATGAGGTCTACAATCCGGATAACCCGGACAATCAGGGGCTGGCGGAATTCATCATCGG CAAGCAGCGTAATGGTCCCATCGGTACGGTGCACATGGCCTTCATCGGCAAGTACACACGCTTCGAGGATCTCGCACCCG ACAGCTATGGAGGCGATTTCGGCGAATGA Protein sequence : MNESLELDKETAALKVPPHSLEAEQSVLGGLMLDNAAWDNVADRLVADDFYRYEHRLIFNVMGQLAEEARPMDVVTLSEA LEGRDQLDTVGGLAYLAELARNTPSASNIRAYADIVRERATLRKLIRAANQVAESAFAPQGRPADELVNEAERLVFQISE ERPKSGGPIGMSDLLAKAVDRIDELFNMQGEMTGLSTGFRDLDDMTSGLQPSDLVIIAGRPSMGKTTFAMNLVEHAVISS DQPVMVFSMEMPAEALMLRMLSSLGRIDQTRVRTGQLEDEDWPRLTSAVNLLKDKKLFIDDTAALSPNEMRSRIRRVVRE HGNLSLIMIDYLQLMQIPGYSENRTGEISEISRSMKGLAKEFGCPVVCLSQLNRSLEQRPNKRPVMSDLRESGAIEQDAD IIGFVYRDEVYNPDNPDNQGLAEFIIGKQRNGPIGTVHMAFIGKYTRFEDLAPDSYGGDFGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-114 | 56 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-100 | 54 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-93 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-96 | 49 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-97 | 49 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-94 | 48 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-89 | 46 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-89 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 8e-78 | 41 |
