|
Name : serS (HELO_3370) Accession : YP_003898439.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2799315 - 2800643 bp Length : 1329 bp Strand : - Note : Seryl-tRNA synthetase - Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768),InterPro: Seryl-tRNA synthetase class IIa, High confidence in function and specificity DNA sequence : ATGGGCGCCTTGTGTTTGCCGCTTTACTTCATCGACGGACAGGATTCCATGCTCGATCCCAAACTGCTGCGCAGCGACCT CGAGGGCGTTGCCCAACGACTGGCCAAGCGAGGTTTCGCTCTCGATACCGAACGACTTGCCGCGCTGGAGTCCCGGCGCC GTGAACTGCAGGCCGAGACCGAGCGGTTGCAGAACGAGCGCAACACGCGCTCCAAGTCGATCGGCAAGGCCAAGGCCAAT GGCGAGGACATTCAGCCGCTGCTCGACGAGGTGAGCGATCTCGGCGATCGCCTCGACGCGGCCAAGACGCGTCTCGCCGA GGTACAGGCGGAGTGGGACGAGCAGGTCAGCGGCCTGCCCAACCTGCCCCACGAGAGCGTGCCGGAGGGGCAGAGCGAGG ATGACAACGTCGAACTGCATCGCTGGGGCACGCCGCGCACCTTCGACTTCGAGATTCGCGATCACGTCGACCTGGGCGCC CAGACCGGCCAGCTCGACTTTGACCTGGCATCCAAGCTGACTGGCGCGCGCTTCGCGGTGATGCGAGGCACCATCGCCCG CCTGCATCGCGCTCTCACCCAGTTCATGCTTGACAAGCAGACCCTCGAGCATGGCTACGAGGAGTGCTATGTCCCTTACA TGGTCAACGACGACTCGCTGTACGGAACCGGCCAGCTGCCCAAGTTCGGCGAGGACCTGTTCCGCCTCGAGGACGAGCGC GGCTATCGCCTGATTCCCACCGCCGAGGTGCCGCTGACCAATTTCGCGCGCGACGAGATCATCGAGCACAAGGCGTTGCC GGTGCGGCTGACCGCCCATACGCCGTGTTTCCGCAGCGAGGCCGGATCCCACGGGCGCGATACCCGGGGCATGATTCGCC AGCACCAGTTCGACAAGGTCGAGATGGTGCAACTGGTCGAGCCGTCGACCAGTTATGACACCCTCGAGGAAATGCGCGGT CACGCCGAGGCGATCCTCCAGGCGCTCGATCTGCCGTATCGTGTCGTGACACTGTGCACCGGCGACATGGGCGCGGGTGC CGCCAAGACCTATGACCTGGAAGTCTGGCTGCCGAGCCAGGAGACCTACCGCGAGATCTCCTCGGTGTCCAACTGCGAAG ACTTCCAGGCCCGCCGCATGCAGGCGCGCTTCCGTCATCCCGACGAGAAGAAGCCGCAGCTGCTGCACACCCTGAACGGT TCCGGGCTGGCGGTGGGGCGCTGCCTGATCGCCGTGATGGAGAATCACCAGAACGCCGATGGCTCGATCAGCGTGCCCGA AGCGCTGCGCGCCTACATGGGCGGCATGGAAACGATCAATGTTGCGTGA Protein sequence : MGALCLPLYFIDGQDSMLDPKLLRSDLEGVAQRLAKRGFALDTERLAALESRRRELQAETERLQNERNTRSKSIGKAKAN GEDIQPLLDEVSDLGDRLDAAKTRLAEVQAEWDEQVSGLPNLPHESVPEGQSEDDNVELHRWGTPRTFDFEIRDHVDLGA QTGQLDFDLASKLTGARFAVMRGTIARLHRALTQFMLDKQTLEHGYEECYVPYMVNDDSLYGTGQLPKFGEDLFRLEDER GYRLIPTAEVPLTNFARDEIIEHKALPVRLTAHTPCFRSEAGSHGRDTRGMIRQHQFDKVEMVQLVEPSTSYDTLEEMRG HAEAILQALDLPYRVVTLCTGDMGAGAAKTYDLEVWLPSQETYREISSVSNCEDFQARRMQARFRHPDEKKPQLLHTLNG SGLAVGRCLIAVMENHQNADGSISVPEALRAYMGGMETINVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-103 | 56 |
