Gene Information

Name : HELO_3312 (HELO_3312)
Accession : YP_003898381.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2725947 - 2726714 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGAAGTCAAGGCCGCGACCTTCGAGGTCAACGGCAGCCGACTGTTGCACCCCACCGACCTGAGCTTCCGCGAGGG
CCAGGTCTACGGGCTGATTGGCCACAATGGCTCCGGCAAGTCGACCCTGCTCAAGCTGCTGGCCCAGCAGCAGCCCGCCA
GTTGCGGCGAGGTGCGCTTCGATGATCGCCCCCTGTCCCATTGGGGGAACCGGGAATTCGCCCGTCAGGTCGCCTATCTG
CCCCAGCACCTGCCCGGTGCCGAGAACCTGACCGGCCGCGAATTGATCGGCTTCGGCCGCTACCCCTGGCACGGACTGCT
CGGACGGCACACCCGCGAGGACCGTGACCAGGTCGAGCGTGCCATCGAACTCACCCACACCCAGGCATTCGCCGACCGCC
TCGTCGACACACTCTCCGGCGGCGAGCGCCAGCGCGTCTGGCTGGCCATGCTGCTGGCCCAGGGCAGTCGTTTCCTGCTG
CTCGACGAGCCCCTGGCGGCGCTGGATATCGCCCATCAGGTCGAGGTCCTGGCACTGGTGCGCCAGCTGTGTCGCGAGCT
CGGCCTGGGCGTGGTCATCGTGCTGCATGACGTCAACATGGCCGCCCGTTACTGCGATCACCTGGTGGCACTGCACAGTG
GCCGAATACTTGCCCAGGGCAGCCCCGGGGAGATGATGGACGATGCCACCCTGGAGGCCATCTACGGCATTCCCATGCGT
GTCATGCCCCACCCCGCCGGGCAGCATCCCATCGCCGTCGTTCATTGA

Protein sequence :
MFEVKAATFEVNGSRLLHPTDLSFREGQVYGLIGHNGSGKSTLLKLLAQQQPASCGEVRFDDRPLSHWGNREFARQVAYL
PQHLPGAENLTGRELIGFGRYPWHGLLGRHTREDRDQVERAIELTHTQAFADRLVDTLSGGERQRVWLAMLLAQGSRFLL
LDEPLAALDIAHQVEVLALVRQLCRELGLGVVIVLHDVNMAARYCDHLVALHSGRILAQGSPGEMMDDATLEAIYGIPMR
VMPHPAGQHPIAVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-42 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-35 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-35 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-35 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_3312 YP_003898381.1 ABC transporter ATP-binding protein VFG0925 Protein 4e-41 42