Gene Information

Name : gspG (HELO_3222)
Accession : YP_003898291.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2609103 - 2609546 bp
Length : 444 bp
Strand : +
Note : general secretion pathway protein G precursor -Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora),InterPro: Bacterial general secretion pathway protein G, High confidence in function and specificity

DNA sequence :
ATGACAGCTCCGCACCGCTCACCCAAGACCCAGGCCGGCTTCACCCTGCTCGAGGTCATGGTCGTGATCTTCATCCTCGG
GCTGCTGGTCGCCATCGTCGCGCCCAACGTGCTCAGCAACCAGGACAAGGCCATGCAACAGAAGGCCAGGGCCGACATCG
CCACCCTGGAGCAGGCCCTCGACATGTATCGGCTCGACAACCATCGCTATCCCACCAGCGAGCAAGGGCTCCAGGCGCTG
GTCGAGGCGCCGCGCCAGGAACCACTGGCCACCAATTACCGCCAGGAAGGCTATGTGCGTCGCCTGCCGGATGATCCCTG
GGGCAACCCCTACGACTATCGCAATCCCGGCGAGCATGGCCGCATCGATGTCTTCAGCCTGGGCGCCGACCGCCAGGCCG
GCGGCGAGGGCAACGATGCCGACATCGGCAACTGGATGCTGTAA

Protein sequence :
MTAPHRSPKTQAGFTLLEVMVVIFILGLLVAIVAPNVLSNQDKAMQQKARADIATLEQALDMYRLDNHRYPTSEQGLQAL
VEAPRQEPLATNYRQEGYVRRLPDDPWGNPYDYRNPGEHGRIDVFSLGADRQAGGEGNDADIGNWML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-41 62
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-41 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_003898291.1 general secretion pathway protein G VFG2050 Protein 2e-41 60
gspG YP_003898291.1 general secretion pathway protein G VFG0180 Protein 7e-35 54
gspG YP_003898291.1 general secretion pathway protein G VFG1871 Protein 4e-33 52