Gene Information

Name : HELO_2923 (HELO_2923)
Accession : YP_003897992.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2249318 - 2249836 bp
Length : 519 bp
Strand : -
Note : Tubulin-specific chaperone E - Homo sapiens (Human),InterPro: Uncharacterised conserved protein UCP028301, Hypothetical protein

DNA sequence : 
ATGTCCAAGGAAGGGTCCGTTGCGCCCAAAGAGCGCATCAATATCAAGTACGTTCCCGCCACCGGAGATAAGCAGGCCGA
CACCGAACTGCCCCAGAAGCTTCTGGTGGTCGGTGATTTCAAGGGCGGCGTCGAAGAGACTCCCATCGAGGAGCGCGAAG
CCGTCTCGGTGAACAAGGACAACTTCCAGTCCGTGATGCGCGAGGCTGGTCTCGGGCTGCGGACCAGCGTGCCGAACCGT
CTCGAGGAAGGTGATGAAGATGAGGCCCGCGAACTGGGGGTCGATCTGCAGTTCAACTCTCTGCAGGACTTCGCGCCAGA
CAGCGTGGCGCGCCAGGTGCCTGAGCTGCGCAAGCTGGTCGAGCTGCGCGAGGCGCTGGTGGCTCTCAAGGGGCCCCTCG
GCAACGTGCCGGCCTTCCGGGAACGCCTGCAGGCCTTGATTGAGAGTCCCGAGACCCGGGACCAGCTGTTGAACGAGCTC
GAACTTCTCGACAGCGAATCCCCCTCGAGCGATTCCTGA

Protein sequence : 
MSKEGSVAPKERINIKYVPATGDKQADTELPQKLLVVGDFKGGVEETPIEEREAVSVNKDNFQSVMREAGLGLRTSVPNR
LEEGDEDEARELGVDLQFNSLQDFAPDSVARQVPELRKLVELREALVALKGPLGNVPAFRERLQALIESPETRDQLLNEL
ELLDSESPSSDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 5e-33 51
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-31 47
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 2e-31 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_2923 YP_003897992.1 hypothetical protein VFG2092 Protein 4e-49 69
HELO_2923 YP_003897992.1 hypothetical protein VFG2474 Protein 3e-37 50