Gene Information

Name : HELO_2922 (HELO_2922)
Accession : YP_003897991.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 2247800 - 2249287 bp
Length : 1488 bp
Strand : -
Note : citrate synthase peroxisomal precursor -Dictyostelium discoideum (Slime mold), Hypothetical protein

DNA sequence :
ATGACCGAATCTACCCAATCCCAGGCTCAGAGCCAGGCTACCGAGAGCACCGAAGACGTCTCCCTGCTTGATCAGGTGAT
GGCCAAGACACGTATGGCTCCTGCTGATGAAGGCTACGACGTGGCCAAGCAGGGGGTCGCAGCTTTCATCAGTGAGCTGC
TCAAGAGCGATGACGGTCAGCAGCAGGTCAACAAGTCGGTCGTCGATCGCATGATCGTCGAGCTGGATCGCAAGATCGGT
CACCAAGTCGACGAGATTCTCCACGATCAGGAGTTCCAGCATCTGGAATCGGCCTGGCGTGGCCTCAAGTTGTTGGTCGA
TCGCACCGATTTCCGCGAGAACATCAAGCTCAACGTGCTGCATGCCACCAAGGAGGAGTTGCTCGAGGACTTCGAGTTCG
CCTCCGAGATCAGCCAGAGCGGGCTCTATCAGCATGTCTATGCCGCCGAGTATGGCCAGTTCGGCGGCGAGCCGGTGGCG
GCGATGATCGGGCATTACGATTTCACGCCCTCGGGCCCGGACATCAAGTTGCTGCAGTATGCTGCCTCGGTCGGGGCGAT
GTCCCACGCACCCTTCCTGTCCTCGGTGGCGCCGAGCTTCTTCGGCATCGACAGCTTCGAGGAGCTGCCCAACATCAAGG
ACTTCAAGGCGATCTTCGAAGGGCCGAAATACGCCCGCTGGCGCAATCTGCGCGAGTCCGAGGATGCTCGCTACCTGGGG
CTGACGGCGCCGCGCTTCCTGCTGCGCACGCCCTACGATCCGGTAGAGAATCCGGTCAAGTCCTTCCATTACCAGGAGTC
GGTCAGCGAGAGCCACGACGATTACCTGTGGGGCAATACCGCCTACCTGCTCGCAGAGCGCCTGAACGACAGCTTTGCCA
AGTATCGTTGGTGCCCGAACATCATTGGTCCGCAGAGCGGCGGGGCAGTGGAGAATCTGCCGATGCACACCTATGAAGCG
TTGGGTCAGGTGCAGAACAAGATTCCCACCGAGGTGTTGATTACCGACCGTCGCGAGTTCGAGATGGCCGAGGAAGGTTT
CATCTCGCTGACCATGCGCAAGGGCAGTGACAACGCCGCCTTCTTTTCCGCCAACTCGGTGCAGAAGCCCAAGTCCTTCC
CCAACACGCCCGAAGGGCGCGAGGCCGAGACCAACTACAAGCTCGGCACCCAGTTGCCTTATCTGTTCATCGTCAATCGC
CTGGCTCACTACATCAAGGTGCTGCAGCGCGAACAGATAGGCTCCTGGAAGGAGCGCCAGGATCTCGAGCGTGAACTCAA
CACCTGGATCCGCCAGTACGTCGCAGATCAGGAGAATCCGCCCGCCGATGTGCGTAGCCGACGCCCGCTGCGTGCCGCCT
CGGTGCAGGTCTCCGACGTGGAAGGCGATCCGGGCTGGTACCAGGTGTCGCTGGCAGTACGCCCGCATTTCAAGTACATG
GGTGCCAACTTCGAACTGTCGCTGGTGGGCCGTCTCGACAAGGATTGA

Protein sequence :
MTESTQSQAQSQATESTEDVSLLDQVMAKTRMAPADEGYDVAKQGVAAFISELLKSDDGQQQVNKSVVDRMIVELDRKIG
HQVDEILHDQEFQHLESAWRGLKLLVDRTDFRENIKLNVLHATKEELLEDFEFASEISQSGLYQHVYAAEYGQFGGEPVA
AMIGHYDFTPSGPDIKLLQYAASVGAMSHAPFLSSVAPSFFGIDSFEELPNIKDFKAIFEGPKYARWRNLRESEDARYLG
LTAPRFLLRTPYDPVENPVKSFHYQESVSESHDDYLWGNTAYLLAERLNDSFAKYRWCPNIIGPQSGGAVENLPMHTYEA
LGQVQNKIPTEVLITDRREFEMAEEGFISLTMRKGSDNAAFFSANSVQKPKSFPNTPEGREAETNYKLGTQLPYLFIVNR
LAHYIKVLQREQIGSWKERQDLERELNTWIRQYVADQENPPADVRSRRPLRAASVQVSDVEGDPGWYQVSLAVRPHFKYM
GANFELSLVGRLDKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-179 70
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 5e-179 70
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 3e-158 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_2922 YP_003897991.1 hypothetical protein VFG2093 Protein 0.0 78
HELO_2922 YP_003897991.1 hypothetical protein VFG2475 Protein 1e-163 60
HELO_2922 YP_003897991.1 hypothetical protein VFG2070 Protein 6e-87 44