Gene Information

Name : HELO_2920 (HELO_2920)
Accession : YP_003897989.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 2245590 - 2247353 bp
Length : 1764 bp
Strand : -
Note : Hypothetical protein

DNA sequence :
ATGCTGAACCGCTACTACCGGGACGAACTGGACTTTCTGAAGCGTCAGGGGCGGGAGTTTGCCGAGGGCAATCCCGGACT
CAGCCGTTTTCTGTCCGAGCAGAGCACCGATCCCGATGTCGAGCGCCTGCTCGAGGGCTTCGCCTTCCTGTCGGGCCGGT
TGCGGGAGAAGGTCGATGACGAGTTCCCCGAGCTGACTCACTCGTTGATCGGCATGTTGTGGCCCAACTACCTGCGGCCG
GTGCCGAGCATGACGGTGATGCAATTCACCCCGCACTGGCACGGGCTGAGCGGCGCCCAGACCGTACCTCGTGGTACCAG
CCTGGCCAGCCGCGAGGTCGAGGGTACGGCTTGCAGTTTTCGTACCTGCCACGAGCTGACGCTCTACCCACTGGCCCACG
ATGGGGTCACGGCGCACCATTCCCGTGAGGCCTCGGTGGTCGAGCTGGATCTGGCGGTGCACAGCGATCAGCCCCTCGAT
GCCCTGGGCGTGGGCGACCTGCGCCTGCACCTGGGCGGCAATGGCTACACGGCCCGTACCCTTTATCTGTGGATGAGCCA
CTACCTGGCCGGTATCGAACTGGAAGTCGACGGCCTGCGCCTGCCGCTGCCCACGCACCTGTTGGCGCCGGTGGGCTTCG
CTGCCGAGGATGCGCTGCTGCCGTATCCGCGCAACGTCTACCAGGGCTATCGCATCCTGCAGGAATACCTGTGCTTCCCC
GAGGCCTTCCAGTTCTTCGACCTGCAGCGCCTGGGCGATTACCTGCCGGCGCGTCTGGCCGAGCGGATGACGTTGCGCTT
CACCTTCTCGCGTACCCTGCCGGCGGATGCCCGGGTAGGGGACGACAGCCTGGCGCTGTACTGCACGCCGGCGATCAACC
TCTTCGCCCATGACGCCGACCCGGTGGACCTCAGTGGCGAGCGCAGCGAATATCGTATCCGTCCCAGCAGCCGCTTCCCG
TCGCATTACGAGGTGTTCAGCGTCGATGATGTGGAGGGATGGCTGGAGAGCGAGAGTGGGCGCATCCGCGGAGAGCCTCG
CCGATACGTGCCTTTCGAGAGTTTCGAGCACCAGATCGAGCGCGATCGGGGGCGTGAAGCGCGCTACTACCGGGTGCGTG
TGCGCGACAGCCTGCGTGGCGACGGTTTCGACCACGACATCGCCTTCGTGCGTGGCGACGAGCAGGCTTGTCTGGGGCTG
CGCGAGACCATCTCGCTGCGCCTGACCTGCAGCAATCGCGAACTGCCCGAGCGGCTGACGGTCGGCGATATCTGCGTGCC
CACCGAGGATAGTCCGGCCTTTGCCGAGTTTCGCAATATCATCCGGCCGACCCCGACCATGCGACCGACCCTGGACGGCA
GTCTGCTGTGGACGCTGATTTCCAATCTGTCGCTGAATTACCTGTCATTGCTCGACCGCGACGCCCTGCGGTCGGTGCTG
CGGGTCTACGACTTCCGGGCGCTGGTCGACCGCCAGGCCGAGCGCATCGCCCAGAAGCGCCTGGCCGGCATCATCGATAT
CAAGACCGAGCCGGTGGACCGGCTTTACCGTGGCCTGCCAGTACGCGGGCTGCGCTCCGAGATGACCCTGGATCAGGAAG
CCTTCGGCGACGAGGGGAGTCTCTTCCTGTTCGCCAGCGTGCTGTCCCGGTTCTTCTCGCTGTACGCCAGCATCAACTCC
TTCCACGAGTTGCACGTCACCAACCTTCACAACCGCGAGCGCTACGCATGGACCTTGCAGTCAGGCCAGCAGCCCCTGAT
GTAG

Protein sequence :
MLNRYYRDELDFLKRQGREFAEGNPGLSRFLSEQSTDPDVERLLEGFAFLSGRLREKVDDEFPELTHSLIGMLWPNYLRP
VPSMTVMQFTPHWHGLSGAQTVPRGTSLASREVEGTACSFRTCHELTLYPLAHDGVTAHHSREASVVELDLAVHSDQPLD
ALGVGDLRLHLGGNGYTARTLYLWMSHYLAGIELEVDGLRLPLPTHLLAPVGFAAEDALLPYPRNVYQGYRILQEYLCFP
EAFQFFDLQRLGDYLPARLAERMTLRFTFSRTLPADARVGDDSLALYCTPAINLFAHDADPVDLSGERSEYRIRPSSRFP
SHYEVFSVDDVEGWLESESGRIRGEPRRYVPFESFEHQIERDRGREARYYRVRVRDSLRGDGFDHDIAFVRGDEQACLGL
RETISLRLTCSNRELPERLTVGDICVPTEDSPAFAEFRNIIRPTPTMRPTLDGSLLWTLISNLSLNYLSLLDRDALRSVL
RVYDFRALVDRQAERIAQKRLAGIIDIKTEPVDRLYRGLPVRGLRSEMTLDQEAFGDEGSLFLFASVLSRFFSLYASINS
FHELHVTNLHNRERYAWTLQSGQQPLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1761 YP_851424.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-113 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_2920 YP_003897989.1 hypothetical protein VFG2078 Protein 0.0 60