Gene Information

Name : HELO_2916 (HELO_2916)
Accession : YP_003897985.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 2241395 - 2242729 bp
Length : 1335 bp
Strand : -
Note : Light-independent protochlorophyllide reductase subunit N - Prochlorococcus marinus (strain MIT 9313), Hypothetical protein

DNA sequence :
ATGGCCAGTCGCAATCCCGTGGTCTGGAGTGAAGGGCTGTTCATCAAGCCCCAGCACTTCCAGCAGCAGCAGCGCAGTCT
GGAAGGGCTGATCGACACCCGTCTGCGCGGCGTCGGTGGCCACCTGCACGGTTTCCTGACCCTGACGCTCAATACCGAGT
ATCTGAGCTTCGGGCGCATCGCTCTCAGCCAGGCCAGTGGCGTGCTCCCCGATGGCACTCCCTTCCGTCTGCCCGACGAC
GACCTGGAGCCCCCGGCGCTGGAGATCGCCGATGCCTCGGTGGCCAATCAGGTGGTCTACCTGGGCGTGCCGCTGGCAAC
CGATGGTGTGGCCGAAGTGAGCTGGGAGACCTCGTCGCTGCCGTCTCGCTACCGTGCCGAAACGCGTGGCGTGCGCGACC
TGCACTCTCGGGCCGGCGACCTGGCCGATCTCGACCTGGCGCGTGTCGCCCCGCGGCTGCTGCTCGAGCAGGAAGACCGC
AGCGCCTACGCCTGTCTGGCGGTGGCACGGATCCTCGAGCGACGTCCGGATGGCAGCCTGGTGCTCGACGAGGCGTTCCT
GCCGACCCTGCTCAATGTCCAGGCGGCGCCGGTGTTGCAGCGTTTCGTCGGCGAAATGGCCGGCTTGATGCGCGAACGGG
CCCGCAATCTGGCCCAGCGGTTGGCCACTCCCAATCAATCCGGAGTCGCCGACGTCGCCGACTTCATGCTGCTGCAGTCG
CTCAACCGTGCCCAGCCGCGTTTTCAGCACCTGGCACGACTCGGTCACCTGCATCCCGAGCGGCTCTACGCCGACATGCT
CGAGGTTTGTTGCGAACTGACCACCTTCACCGCCGAGTCACGGCTGCCTCCGGAATTTCCGGCCTATGACCATGACCGGC
CGGAGGCCGCTTTCCGGCCGCTGATGCAGAGCCTGCGCCAGTCGCTGTCCACCGTGCTCGAGCCGCGCGCCATGGCCATC
CAGCTGCAGTCGCGCCGCTTCGGGCTCAAGGTTGCCACCCTGGCCGATCACAGCCTGCTCGACGATGCCGACTTCATCCT
GGCAGTGCGTGCGGACCTGCCGCCGGAACGCTTGCGCAAGCTGTTCGTGCAGCAGACCAAGGTGGCCAGCGTCGAGCGTA
TTCGCGACCTCATCAGCCTGCAGTTGCCGGGCATCCCGCTCGAGCCTCTGCCGGTGGCGCCGCGCCAGTTGCCGTTCCAT
GCCGGTTACACCTACTTCCGTCTCGACCGCCAGAGCGAGGCCTGGAGCATGCTGCGCGGCGCCAGCGGCTTCGCCTTCCA
CGTTGCCGGTGACTTCCCGGGACTGGAAATGCAGTTCTGGGCGATCAGGAGCTAA

Protein sequence :
MASRNPVVWSEGLFIKPQHFQQQQRSLEGLIDTRLRGVGGHLHGFLTLTLNTEYLSFGRIALSQASGVLPDGTPFRLPDD
DLEPPALEIADASVANQVVYLGVPLATDGVAEVSWETSSLPSRYRAETRGVRDLHSRAGDLADLDLARVAPRLLLEQEDR
SAYACLAVARILERRPDGSLVLDEAFLPTLLNVQAAPVLQRFVGEMAGLMRERARNLAQRLATPNQSGVADVADFMLLQS
LNRAQPRFQHLARLGHLHPERLYADMLEVCCELTTFTAESRLPPEFPAYDHDRPEAAFRPLMQSLRQSLSTVLEPRAMAI
QLQSRRFGLKVATLADHSLLDDADFILAVRADLPPERLRKLFVQQTKVASVERIRDLISLQLPGIPLEPLPVAPRQLPFH
AGYTYFRLDRQSEAWSMLRGASGFAFHVAGDFPGLEMQFWAIRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-82 43
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 5e-82 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_2916 YP_003897985.1 hypothetical protein VFG2082 Protein 6e-132 61
HELO_2916 YP_003897985.1 hypothetical protein VFG2065 Protein 3e-99 48