Gene Information

Name : vgrG (HELO_2907)
Accession : YP_003897976.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : rhs element Vgr protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 2227498 - 2229576 bp
Length : 2079 bp
Strand : -
Note : Tyrocidine synthetase 2 - Brevibacillus parabrevis,InterPro: Rhs element Vgr protein, Hypothetical protein

DNA sequence :
ATGGCCGATCGCAGCGGACTGCAGTTCACCCTGAGCCTGACCGGCGCCGGTGAGGCCGACCTGGCGGTGGTCGACTTCAC
CCATGAAGAGGCGCTGTCGTCGCCGTTTCATCTTCACGTGCGCTTTGCCAGCCGCGCCGTCGACCTCTCGCCGGAAGCGC
TGCTCGACCGCCCGGCGAGCCTCACCGTGTGGCAGGACGGCGTGGCCCAGCGACGGGTTCACGGCATCGTCGCCGAATTC
GGTCGCGGCGACCGCGGCCATCGGCGCAGCCACTACGAGGTCGTGATCCGCCCCTCGCTGTGGCGGCTCTCGTTGCGCCA
GAACTCGCGGATCTTCCAGCGCGTCTCGCCGCTGACCATCCTCAACACCCTGTGCGAGGAACGCGGCCTGACCGACGTGG
CCTTCGCGGTGACCCGCGAGCCCGCCGAGCGCGAGTACTGCGTGCAGTACCGCGAGACCGACCTGGCCTTCGTCGAGCGC
CTGGCCGCCGAGGAAGGGTTGTTCTACTTCCATGAGTTCGAGGATGGCGACCTCGGCGCCCATCGGCTGGTGTTCGCCGA
CGATCCCCAGGTGCTCACCGGGCTCGGCGAGCGCCCCTACCACCATCGCGCCGGCGGCACCGCGCCGCAGCGTCACCTGC
GCCGGCTGACCCAGACTGCCCGGGTGCGCCCGGCCCGGGCCCAGCTCAAGGACTACAGCTTCAAGCGCCCGGCCTACGCG
CAACTGCACGAGCGCCAGGGCGACGGGCTGGAGCAGCACAGCCAGCGGGGCGACTACGAACACTACGACTACCCGGGCCG
CTACAAGGCCGACGCCTCGGGCCAGGCCTTCACCCGCCACCGGCTGGAGCACCTGCGCCACGACGCCCTGACCCTGGCCG
GCGAGAGCGACCTGCCCGAGCTGGCCCCGGGCACGCGCTTCACCCTGGCCGACCACGACGTCAGCGAGCTCAACCGCGGC
TGGCAGGTCGTCAAGGTGGTCCACGCGGGCGAACAGCCCCAGGCACTGGGCGAGGACGCCGCCCAGGCCGACGGCATGAC
CCGTTACCACAACACCCTGACGCTGACCCCGGACGACACCGCCTGGCGGCCCGCGCCCGAGCCCAAGCCGCGGGTCGACG
GCCCTCAGGTGGCCTTCGTGGTGGGCCCCGAGGGCGAGGAGATTCACTGCGACGCTCACGGCCGGGTGCGCTGCCAGTTC
CCCTGGGACCGCTATGCCGAGCCCAATGAAACCGCCAGTGCCTGGCTGCGCGTCAGCCAGGGCTGGGCCGGCGGCGGCTA
CGGCATGATGGCGATTCCGCGCATCGGCCACGAGGTGATCGTCTCCTTCCTGGAAGGCGACCCCGACCAGCCGATCATTA
CCGGACGCACCTACCACGCGGTGAATACGCCGCCCTACGAGCTGCCGGCGCACAAGACGCGCACCGTGCTGCGTACCCAG
ACCCACCAGGGCGAGGGCTTCAACGAACTGCGCTTCGAGGACCAGCACGACCAGGAACAGATCTGGGTGCACGCGCAGAA
GGACCTGGAGCTGCTCACCGAGAACGACCGCACCGAGGAAATCCGCCGCGACAGCCATCTGGCCGTCAAGCGCGACCGGG
TGAGCGAACTCGACCGTGACGACCACCTCACCGTGCATGGCGAGCGGCGTACCCAGATTGATGGCGACGACCACCTCAAC
GTGGGCCAGACCCGTCACGAGAAGATCGGTCGCGCCCAACTCGTCGAGGCCGGCAGCGAAGTGCACCACAAGGCCGGCAT
GAAGGTGGTGGTCGAAGCCGGCGCCGAGATCACCCTCAAGGCCGGTGGCAGCTTCCTGAAGCTCGACCCCAGCGGCGTGA
CCATCAACGGGCCGAGCGTGAAGATCAACTCCGGCGGCAGCCCCGGCTCGGGCACCGGGCAGAGTGCCCAGGCGCCGATA
TTGCCGGGGGAAGCGGGTGAGGAAACGCATGAGGCGATCCAGCCCATCACTCACGAGGCCTTGCTGTCGGCATCGGCTGA
GGAGGCTAGTGTCGTGCAGCTCTGCCAGAAACAGACCGATGGCAGTTGCCCGCTGGCTGACTGCCCGTGCCGTAGCTAG

Protein sequence :
MADRSGLQFTLSLTGAGEADLAVVDFTHEEALSSPFHLHVRFASRAVDLSPEALLDRPASLTVWQDGVAQRRVHGIVAEF
GRGDRGHRRSHYEVVIRPSLWRLSLRQNSRIFQRVSPLTILNTLCEERGLTDVAFAVTREPAEREYCVQYRETDLAFVER
LAAEEGLFYFHEFEDGDLGAHRLVFADDPQVLTGLGERPYHHRAGGTAPQRHLRRLTQTARVRPARAQLKDYSFKRPAYA
QLHERQGDGLEQHSQRGDYEHYDYPGRYKADASGQAFTRHRLEHLRHDALTLAGESDLPELAPGTRFTLADHDVSELNRG
WQVVKVVHAGEQPQALGEDAAQADGMTRYHNTLTLTPDDTAWRPAPEPKPRVDGPQVAFVVGPEGEEIHCDAHGRVRCQF
PWDRYAEPNETASAWLRVSQGWAGGGYGMMAIPRIGHEVIVSFLEGDPDQPIITGRTYHAVNTPPYELPAHKTRTVLRTQ
THQGEGFNELRFEDQHDQEQIWVHAQKDLELLTENDRTEEIRRDSHLAVKRDRVSELDRDDHLTVHGERRTQIDGDDHLN
VGQTRHEKIGRAQLVEAGSEVHHKAGMKVVVEAGAEITLKAGGSFLKLDPSGVTINGPSVKINSGGSPGSGTGQSAQAPI
LPGEAGEETHEAIQPITHEALLSASAEEASVVQLCQKQTDGSCPLADCPCRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 2e-131 46
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-114 42
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 2e-114 42