Gene Information

Name : aldh (HELO_2817)
Accession : YP_003897886.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2111369 - 2112889 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence : 
ATGATCTACGCCAATCCCGGTACGCCCGATGCCCTGATCAATTTCGACGCGCGTTACGGCAACTATATCGGGGGCGAGTT
CGTGCCGCCGGTGCAGGGGCGTTATTTCGACAACGTCAGCCCGGTCAACGGCGAGGTGATCTGCGAGATCCCCCGTTCCG
GTGCCGAGGACATCGAGCTTGCCCTCGACGCGGCCCACGCCGCCGCTCCCGACTGGGGACGAACCTCCGCCACCGAACGT
GCCAACCTGCTGCTGAAGATCGCCCAGCGCATCGAGGATAACCTCGAGATGCTTGCCGTCGCCGAAACCTGGGACAACGG
CAAGGCGGTGCGCGAGACGCTCAACGCCGATCTTCCCCTGGCCGTCGACCACTTCCGCTATTTCGCCGGCTGCATTCGCG
CCCAGGAAGGCACGGCGGCCGATATCGACGCCAACACCGTGGCCTATCACTTCCATGAGCCGCTGGGAGTGGTGGGACAG
ATCATTCCCTGGAACTTTCCACTGCTGATGGCCACCTGGAAGCTGGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGTCCT
CAAGCCCGCCGAACAGACTCCGGCCTCGATCCTCGTGCTGATGAAATTGATCGGCGACCTGCTGCCTGCCGGCGTGGTCA
ATGTGGTCAACGGCTATGGCGCCGAGGCCGGCGAGGCACTGGCGACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCCACGCCGGTGGGCTCGCACATCCTCAAATGCGCCGCCGCCAATATCATTCCTTCCACCGTGGAGCTGGGCGGCAAGTC
GCCCAACATCTACTTCGCCGACATCATGCAGGCCGAGCCCGAGTTCATCGACAAGGCAGTCGAGGGGCTGGTGCTGGCTT
TCCTCAATCAGGGCGAGGTGTGTACCTGCCCGAGCCGGGCGCTGATCCAGGAGTCGATGTACGACGACTTCATGGCCCGG
GTGGTCGAGCGCACCAAGGCGATCAAGCGCGGCAATCCGCTGGATACTGACGTCCAGGTCGGTGCCCAGGCCTCCCAGGA
GCAGTTCGACAAGATCATGTCCTACATGGATGTCGCCCGCGAGGAAGGCGCCGAGTTCCTTACCGGCGGTGACCGCGAAA
GCTTCGATCCCGCCTACGACAAGGGCTATTACATCCAGCCGACCTTGCTCAAGGGGCACAACAAGATGCGTGTCTTCCAG
GAGGAAATCTTCGGCCCGGTGGTCGGGGTGACGACCTTCAAGGACGAAGCCGAGGCGCTGGCCATCGCCAACGATACCGA
GTTCGGCCTGGGGGCCGGGGTGTGGAGTCGCGACATCAACGTGGCCTTCCGCATGGGACGCGGCATCCAGGCCGGCCGGG
TTTGGACCAACTGCTACCACCAGTATCCGGCACATGCCGCCTTCGGGGGCTACAAGAAGTCCGGCGTCGGTCGCGAGACC
CACAAGATGGCCCTTGAGCACTATCAGCAGACCAAGAACCTGCTGGTCAGCTACGACACCAATCCGCTCGGTTTCTTCTG
A

Protein sequence : 
MIYANPGTPDALINFDARYGNYIGGEFVPPVQGRYFDNVSPVNGEVICEIPRSGAEDIELALDAAHAAAPDWGRTSATER
ANLLLKIAQRIEDNLEMLAVAETWDNGKAVRETLNADLPLAVDHFRYFAGCIRAQEGTAADIDANTVAYHFHEPLGVVGQ
IIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMKLIGDLLPAGVVNVVNGYGAEAGEALATSKRIAKIAFTG
STPVGSHILKCAAANIIPSTVELGGKSPNIYFADIMQAEPEFIDKAVEGLVLAFLNQGEVCTCPSRALIQESMYDDFMAR
VVERTKAIKRGNPLDTDVQVGAQASQEQFDKIMSYMDVAREEGAEFLTGGDRESFDPAYDKGYYIQPTLLKGHNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGVWSRDINVAFRMGRGIQAGRVWTNCYHQYPAHAAFGGYKKSGVGRET
HKMALEHYQQTKNLLVSYDTNPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-154 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-161 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-161 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-161 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-160 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldh YP_003897886.1 aldehyde dehydrogenase VFG0082 Protein 3e-154 66