Gene Information

Name : gacA (HELO_2810)
Accession : YP_003897879.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : response regulator GacA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2101546 - 2102301 bp
Length : 756 bp
Strand : +
Note : Response regulator gacA - Pseudomonas aeruginosa,InterPro: Response regulator receiver, High confidence in function and specificity

DNA sequence : 
ATGCCAAGGTATGCGCAATTCAACGCAGGCTGTTCGGCCAGGATCGCGTCTCTTGCAACGCGGGCCATACCCCCGCATTC
CGTCCACTGTACTGTTAGGAGTTCCTTCTTGATCAGGGTTCTCGTCGCCGATGACCATCACTTGGTGAGGACCAGCATCG
CCCATCTGCTGAATGACGAACCAGGCATCAGCGTGATCGGCGAAGCTGCCGATGGCGAGCAAGCCATCGGTCAGGCCCGC
CAACTCAAGCCGGACGTCATTTTGATGGATATCCGCATGCCCGGCATAGGCGGCCTGGAGGCCACTCGCAAGATCACTCG
CCTGACCAGTGACGTACGCATCCTGGTACTGACCGCCTTCATCGAAGAAGCCTTCGCCCAGCGACTGCTCGAGGCCGGCG
CCCATGGCTTCATCAGCAAGGGATCTCAGCACGACGAGATGGTCCAGGCGATCCGCAGCGTCTTCGGCGGAAAGCGCTAT
ATCAGTCCCGACATCGCCCAACGCCTGGTGCTGTTTCGCATCGACTCCAACGACAACCCCTTCGACCAGCTTTCCCAGCG
CGAGCTCCAGGTGGCGATGATGATCGTCAACTGCCAGAAGGTCGCCGACATCGCCGACCGCATGTTCCTGAGCCCCAAGA
CCGTCAACACCTACCGCTACCGCATCTTCGAGAAACTCGACGTGCATTCCGACGTGGAGCTGACCCACCTGGCTCTGCGA
TACGGATTGGTGGACGGCTTCAGCGAGGTGGACTGA

Protein sequence : 
MPRYAQFNAGCSARIASLATRAIPPHSVHCTVRSSFLIRVLVADDHHLVRTSIAHLLNDEPGISVIGEAADGEQAIGQAR
QLKPDVILMDIRMPGIGGLEATRKITRLTSDVRILVLTAFIEEAFAQRLLEAGAHGFISKGSQHDEMVQAIRSVFGGKRY
ISPDIAQRLVLFRIDSNDNPFDQLSQRELQVAMMIVNCQKVADIADRMFLSPKTVNTYRYRIFEKLDVHSDVELTHLALR
YGLVDGFSEVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-55 52
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-55 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_003897879.1 response regulator GacA VFG1889 Protein 8e-50 45