Gene Information

Name : HELO_2474 (HELO_2474)
Accession : YP_003897543.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 1712566 - 1713900 bp
Length : 1335 bp
Strand : -
Note : Uncharacterized membrane protein VP2115 - Vibrio parahaemolyticus,InterPro: Na+/H+ antiporter NhaC, High confidence in function and specificity

DNA sequence :
ATGAACGCAGTCGTCCTGGCCATCCTGGTCATGGTCACCCTCAGCCTGATGCGCGTGTCCGTCGTGTTCGCGCTGATCGC
CGCCGCCCTGGTCGGCGGTCTTTACGCGGGAATGCCGCTGGGCGAGATCCTCTCCGCCTTCAACGACGGGCTGGGCAACG
GCGCCAAGGTAGCCATCTCCTACGCCGTGCTGGGCGCCTTCGCCGTGGCCCTGTCACGTTCGGGCATCACCCAGCTGCTC
TCCAACAAGGCCATCGCCAGGCTGGGACTGGACGACGGGATTCCCAACCGCCAGTTGATCGTCTTCACCCTGCTCGGCGT
GCTGCTGGCCGCGGCAGTGAGCTCCCAGAACCTGATTCCGGTGCATATCGCCTTCATCCCGGTGCTGGTGCCACCGCTGC
TCAAGCTGATGAACCACCTGCAGCTCGATCGCCGGGCCGTTGCCTGCGTAATCACTTTCGGCATCACCGCGCCCTATATG
CTGCTGCCGGTCGGGTTCGGCTCGATCTTCCTTCACGACATCCTGCTGACCAACCTCAACGAGAATGGCCTGGACGTGAC
CGCCGGCATGGTGCCGATGGCCATGATCGTGCCCATCGGCGGCATGGCCCTGGGGCTCGTGGTCGCCTTGCTGTTCAGCT
ACCGTCGCAAGCGTAGCTACCAGGACATCGACCTGGCCCATGGCGACGAGACGCCCAGCCAGGCCGCCCAGCACCTCAAG
CCCTGGCAGATGGTGGTTCTGGCAGTGGCGCTGGTGGGTACCGTCACGGTCCAGCTGTTCACCGGTTCGATGGTGATCGG
CGGGCTCTTCGGCTTCGCCCTGCTCTCGGTGAGCGGTGTGTTCCGCTGGCATGAACAGGACGACATCTTCACCGAAGGCA
TGCGCATGATGGCGCTGGTCGGCTTCATCATGATCTCGGCGGCAGGCTTCGCCAGCGTGATGCAGGCCAGTGGTGAAGTC
GAGGCGCTGGTTACCAGTTCCACCGAGATGATCGGCGACAACAAGGGCCTGGCCGCCCTGATCATGCTGCTGGTGGGGCT
GTTCATCACCATGGGGATCGGCTCGTCGTTCTCGACCATTCCGATCATCGCCTCGCTCTACGTGCCCCTGGCGCTGAACT
TCGGTTTCTCGCCCATGGCGACCATCGCCCTGGTGGGTGCCGCGGCCGCCCTCGGGGATGCCGGCTCACCGGCCTCCGAC
TCGACCCTCGGCCCCACCGCCGGCCTCAATGCCGACGGCCAGCACGACCACATCTGGGACAGCGTGGTGCCGACCTTCCT
GCACTACAACATCCCGCTGGTAGCATTCGGCTGGATCGCCGCCATGACGCTCTGA

Protein sequence :
MNAVVLAILVMVTLSLMRVSVVFALIAAALVGGLYAGMPLGEILSAFNDGLGNGAKVAISYAVLGAFAVALSRSGITQLL
SNKAIARLGLDDGIPNRQLIVFTLLGVLLAAAVSSQNLIPVHIAFIPVLVPPLLKLMNHLQLDRRAVACVITFGITAPYM
LLPVGFGSIFLHDILLTNLNENGLDVTAGMVPMAMIVPIGGMALGLVVALLFSYRRKRSYQDIDLAHGDETPSQAAQHLK
PWQMVVLAVALVGTVTVQLFTGSMVIGGLFGFALLSVSGVFRWHEQDDIFTEGMRMMALVGFIMISAAGFASVMQASGEV
EALVTSSTEMIGDNKGLAALIMLLVGLFITMGIGSSFSTIPIIASLYVPLALNFGFSPMATIALVGAAAALGDAGSPASD
STLGPTAGLNADGQHDHIWDSVVPTFLHYNIPLVAFGWIAAMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 1e-103 58
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 1e-103 58
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-88 54
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-88 54
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-88 54
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-88 54