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Name : kpsD (HELO_2391) Accession : YP_003897460.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Virulence Product : polysaccharide export protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 1586238 - 1588016 bp Length : 1779 bp Strand : + Note : polysialic acid transporter kpsD precursor -Escherichia coli,InterPro: polysaccharide export protein, High confidence in function and specificity DNA sequence : GTGATCAATCGCGATACTTCGACGTTGAGTGCCCTGCTGGTAACGGGCTTGCTGCTGCTGCCCGGCTCGGCCAATGCCCA GAGCTTCCTGCAGTCGAGCATGGGGCTTTCGGAGCAGGAACAGAGCCAGTCCCGGCAGTCTCAGTCTGCGTCGGCACAAG CACAGAGTGGCGGTCAGAGCAGCAATGTCGACGCTTCTCCTCGCGCCAATTGGCAGAGCGCCAACTATGGCCCGGTGGTG AAGCCCAACAACTATGGAATGGAGGCCAAGCCACCCAAGGCCGAAATGGACAAGCTGGAGCCATTCGGGGCCAATCTCTT CGAAGGGGGCTTCCGTGGCACCATGGCAGATGGCCTCAATGCCAGTTACAAGATCAAGCCCGGTGACCAGGTGACGCTAC GCGCCTGGGGCGCCGTGGAACTCGACCAGACCATACCGGTGGATGCCCAGGGCAATGTTTACATTCCCTCTATCGGGCCG GTGCAGGTACAGGGGATGAACAGTCAGCAACTGGATGCCACTGTTCGCTCCGCGATCCAGAACGTCTATCCCCAGGACGT GCAGGTATACACCAACCTGCAAGGGGTCCAGCCGGTCGGCGTATTCGTGACCGGTTATGTCGAAAGTCCGGGGCGTTACG CTGGAACACCCTCCGACTCGGTACTCTACTTCCTCGATCAGGCGGGGGGCATCGACAAGGATCTCGGCAGCTACCGCCAG ATTCGGGTGGAGCGTGACGGCCGTACCGTCGCTAGCGTCGACCTGTACGATTTCCTGCTCGACGGTGACATCCAGCGCCC GCAATTCAAGGACGGCGATACCATCGTGGTCGAGGAACGCGGTCCGGCGATCGCCGTGACGGGGGATGTGAAACGCGAAT ATCGCTATGAGCTGCAAGGCTCGCAGCTCAGTGGCGCCGATGTGCAGCGACTCGCCCGTCTGAACAGCGGCGTTTCGCAC GTGCTGCTGCGTGGTGACCGCAGTGATGGTCCGATGGCCGAATACTTCCCGCTCGACGAGTTTGCCAGCCAGACCGTGCA GAGCGGCGACGAAGTCCTGTTCAGCTCCGATCAGCGTGCCGAGACCATCGTGGTCGAAGTCGAGGGCAGCTTCTATGGCC CGTCCCGCTACGCTCTGCCGCGTAACGCACGGCTTGGCGAGTTCCTTGACGCCATCGGCGTACCCAAGGAGATGACCAGC GTTCAGGATATCTCGATCCTGCGCGAGAGCGTCGCCAAGCAGCAGGAAGAGGCACTCGACAAGAGCCTGCAGCGTTTGCA GACGACCTACCTCGGTTATCCGGCCCGTACCGCGGAAGAAGGCAAGATTCAGGTGCAACAGGCCGAGCTGATCGAGCGTT TCGTGCAGAAGGCCTCGAAGGTCGAGCCCACCGGCCAGCTGGTCGTGGCTCGCGGGAACAGCGGAATCGCTGATGTGCGC CTGCAGGATGGCGACGTGGTCAAGATTCCCGAGACCAACGATGCTGTCCTGCTCAGTGGCGAGGTCACCATGCCGCAGGC AGTGGTCTACACACCGGGCATGTCCGTCGAGGATTACATCGAACAGGCCGGTGGCTTCACGCCACGCGCCAACGACGATG GAATCCTGGTGGCGCATCGCAATGGTGCCGTTATCCCGGCCGACGATGCGAAGCTGCGTGCCGGCGACGAAATCATCGTG TTGCCGAGGGCGCCGACCAGCAATCTCGAGCTGGCCAAGTCGATCACGCAGATCCTCTATCAGGTTGCCGTGGCCACCAA GGTCGCGCTCGATCTCTGA Protein sequence : MINRDTSTLSALLVTGLLLLPGSANAQSFLQSSMGLSEQEQSQSRQSQSASAQAQSGGQSSNVDASPRANWQSANYGPVV KPNNYGMEAKPPKAEMDKLEPFGANLFEGGFRGTMADGLNASYKIKPGDQVTLRAWGAVELDQTIPVDAQGNVYIPSIGP VQVQGMNSQQLDATVRSAIQNVYPQDVQVYTNLQGVQPVGVFVTGYVESPGRYAGTPSDSVLYFLDQAGGIDKDLGSYRQ IRVERDGRTVASVDLYDFLLDGDIQRPQFKDGDTIVVEERGPAIAVTGDVKREYRYELQGSQLSGADVQRLARLNSGVSH VLLRGDRSDGPMAEYFPLDEFASQTVQSGDEVLFSSDQRAETIVVEVEGSFYGPSRYALPRNARLGEFLDAIGVPKEMTS VQDISILRESVAKQQEEALDKSLQRLQTTYLGYPARTAEEGKIQVQQAELIERFVQKASKVEPTGQLVVARGNSGIADVR LQDGDVVKIPETNDAVLLSGEVTMPQAVVYTPGMSVEDYIEQAGGFTPRANDDGILVAHRNGAVIPADDAKLRAGDEIIV LPRAPTSNLELAKSITQILYQVAVATKVALDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsD | YP_854331.1 | polysialic acid transport protein KpsD precursor | Not tested | PAI I APEC-O1 | Protein | 5e-90 | 41 |
| kpsD | AAZ04468.1 | polysialic acid transport protein precursor | Virulence | PAI I APEC-O1 | Protein | 4e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsD | YP_003897460.1 | polysaccharide export protein | VFG1448 | Protein | 2e-90 | 41 |
