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Name : topB (HELO_2301) Accession : YP_003897370.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1481787 - 1483730 bp Length : 1944 bp Strand : - Note : High confidence in function and specificity DNA sequence : ATGCGCCTGATCATCGCCGAGAAGCCCAGCCTGGCCCGCGCCATCGCCAATGCCCTGCCTGCCTCGCCGCGCCGGGAGGA AGGCGCCCTGGTGGCCGGAGATACCGTCGTCACCTGGTGCCTCGGCCACCTGCTGGAACAGGCGCCACCGGATGCCTACG ACCCGGCCCTCAAGACCTGGCGGCTCGACAGCCTGCCGATCCTCCCGGATCACTGGAAGCTCATGCCGCGCCCCAAGGCA CGCGGCCAGTTGGCGGTGATCCGTCGATTGCTGAAGAGCGCCGACCAGGTGGTCCACGCCGGTGACCCGGATCGCGAAGG CCAGTTGCTGGTCCAGGAAGTGATCGAGCACCTCGGCTGGAAGCGCGACGTGGCACGCCTGCTGGTCAGCGATCTCAACC CGCCGGCGGTCAAGCGTGCTCTCGAGCGTCTCGAGGACAATCGGCGCTATGCCTCGCTCTACCGCGCCGCCCAGGCGCGT GCCAGGGCGGATTGGCTGTACGGCATCAACCTGACCCGAGCCTGGACGCTGGTCGGGCGCCAGGCCGGACACGACGGCGT GCTCTCGGTGGGTCGTGTGCAGACGCCGGTGCTCGGCCTGGTGGTCCGGCGCGACGCCGAGATCCGCGACTTCGAGCCGC GCCCCTTCTTCGTGCTGTGGGTCGATCTGGTGGTCTCCCGAGGCCAGTTGCGCGCCTGGTGGGTGCCAGGCGACACTCAC CGGCTGGACGACCAGGGGCGCCTGCTCGACCGAGCCCCGGCCGCCGCCCTGGCCGACCGACTGCCCGGCGCCGAGGGCCG CCTGGACAGCCTGGCCAGTCGCGACAAGCGCCAGGCGGCCCCGCTGCCCTACTCGCTGTCGGCCCTTCAGGTCGACGCCG CACGCCGCCACGGGCTCTCGGCCAAGGCGGTGCTGGACGTCTGCCAGCGCCTCTATGAGCGCCACCAGTTGATAACCTAT CCACGCTCGGACTGCCGCTATCTGCCCGAGGAGCACTTCGCCCAGGCGCAGCGCACCCTGAGCGGCGCATGCCGTAACGA CGAGACCCTGAGCCGCTGGCTGGCCGGAGCCGACTTTTCCCGTCGCTCCAAGGCCTGGGACGACAAGAAGGTCGGCGCTC ACCACGCCCTGGCCCCCACCGGCAAGCCCGCCGACCTCGATCGGCTGTCGCGCCAGGAAGCCGACGTCTTCCGCCTGATT GCCCGCAACGTGCTGGCCCAGTTCTACCCGGCCCTGCAGACCCGTGAGGTCAAGGCCGAATTCCTGATCGCCGGGGAACG CTTCCGCGCACGCGGCCAGGAAGTGCTCGAACCCGGCTGGAAGCCCTTGTTCACCACCCGTGACGAGGCACCGCCCCTGC CGCCACTCAGCGAAGGCGAAGCCTGCCGTGTCGAGCAGGCCGGCGTGGAGGACCGCGAGACCCGGCCGCCCGAACACTTC ACCGACGCCAGCCTGATCAAGGCGATGATGAACATCGCCCGCTACGTGGACGACCCGGCGATCCGCCGCACCCTGCGCGA CTCCGACGGTCTCGGCACCGAGGCGACCCGCGCCGGCATCATCGAGACGCTCCTGGAGCGCGGCTATCTAGTACGCGAGG GCAAGAGCCTCAAGGCCAGCCGGCTCGGCAGCGCCCTGATCGCCTCGTTGCCGGAAGCCGTGGGCCGCCCCGAGCGTACC GCCCAATGGGAACAACGCCTGGCGAACATCGCCGAGCAAGACGATGCGCCAGCGCCCTTCCTCGAAGGACTGATCGACGA TTTGCGCGGCCTGCTCGGTCACGCCGACGCCGGACGTGTGCGCAGCGCCCTGAGCGAGGCCCGAGGGCCCGAGCCTAAAG CGAGCAAGCCCGCCCGCGGCCGGGGGCGAAGCACCAAGCGCGGCAGTGGTCAGCGCCGCCAAGGCAAGGGCACACGACGT GCAGCGGGAGGCAAGCGCCAATGA Protein sequence : MRLIIAEKPSLARAIANALPASPRREEGALVAGDTVVTWCLGHLLEQAPPDAYDPALKTWRLDSLPILPDHWKLMPRPKA RGQLAVIRRLLKSADQVVHAGDPDREGQLLVQEVIEHLGWKRDVARLLVSDLNPPAVKRALERLEDNRRYASLYRAAQAR ARADWLYGINLTRAWTLVGRQAGHDGVLSVGRVQTPVLGLVVRRDAEIRDFEPRPFFVLWVDLVVSRGQLRAWWVPGDTH RLDDQGRLLDRAPAAALADRLPGAEGRLDSLASRDKRQAAPLPYSLSALQVDAARRHGLSAKAVLDVCQRLYERHQLITY PRSDCRYLPEEHFAQAQRTLSGACRNDETLSRWLAGADFSRRSKAWDDKKVGAHHALAPTGKPADLDRLSRQEADVFRLI ARNVLAQFYPALQTREVKAEFLIAGERFRARGQEVLEPGWKPLFTTRDEAPPLPPLSEGEACRVEQAGVEDRETRPPEHF TDASLIKAMMNIARYVDDPAIRRTLRDSDGLGTEATRAGIIETLLERGYLVREGKSLKASRLGSALIASLPEAVGRPERT AQWEQRLANIAEQDDAPAPFLEGLIDDLRGLLGHADAGRVRSALSEARGPEPKASKPARGRGRSTKRGSGQRRQGKGTRR AAGGKRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-110 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 5e-110 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-110 | 42 |
