Gene Information

Name : glnA1 (HELO_1126)
Accession : YP_003896194.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 146059 - 147465 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGACAAGACTCTCGCCCTGATTGAAGAACATGATGTGAAGTGGGTCGATCTGCGCTTCACCGACACCAAAGGCAA
GGAACAGCACGTCACCATCCCGGCTCGCGATGTGGACGAAGAGTTCTTCGAGAACGGCCAGATGTTCGATGGCTCCTCCA
TCAATGGCTGGAAGGGGATCAACGAGTCGGACATGATCCTGCGTCCGGAGGACGGCACCGGCTTCCTCGACCCCTTCACC
GAAGATGCCACCCTGGTGCTGCGCTGCGACATCATCGAGCCGGCCACCATGCAGGGCTATGAGCGTGATCCGCGCTCCAT
CGCCAAGCGTGCCGAGGCGTATCTGCAGTCTTCCGGCCTGGGCGACACCGCCTTCTTCGGTCCGGAGCCCGAGTTCTTCG
TCTTCGACGAGGTGCACTGGAAGGCCGACGCCGAAGGCGCCATGTACAAGATCACCTCCGAAGAGGGTGCCTGGGCCACC
GACCGCCACGTCGAAGGCGGCAACCTGGGTCACCGTCCGCGGGTCAAGGGTGGCTACTTCCCGGTACCGCCGGTGGACAG
CTTCCACGACATCCGTGGCGTGATGTGCAGCACCCTGGAGGCCATCGGCCAGACCGTCGAAGTGCATCACCATGAGGTGT
CCAACGCCGGCCAGAACGAGATCGGCGTCAAGTTCAACACCCTGGTGAAGAAGGCCGACGAGCTGCAGGAAATGAAGTAC
GTGGTGCACAACGTGGCCCACGCCTACGGCAAGACCGCGACCTTCATGCCCAAGCCGGTGGTCGGTGACAACGGTTCCGG
CATGCACGTCCACCAGTCCTTCTGGAAGGACGGCCAGAACCAGTTCGCCGGTGACGAGTACGCTGGTCTCTCCGAGATGG
CTCTGTACTACATCGGCGGCATTATCAAGCATGCCCGTGCCCTGAACGCCTTCACCAACGCGTCGACCAACTCCTACAAG
CGTCTGGTGCCGGGTTTCGAGGCGCCGGTGATGCTGGCCTACAGTGCGCGCAACCGTTCTGCGTCCATCCGTATCCCCTA
CACCGCAAGCCCGAAGGGCAAGCGCATCGAGGCCCGCTTCCCGGACCCGACCGCCAACCCCTACCTGTGCTTCGCGGCGA
TGCTGATGGCCGGCATCGACGGCATCAAGAACAAGATCCATCCCGGCGATGCCATGGACAAGAACCTCTATGACCTGCCG
CCGGAAGAAGGCAAGGCCATCCCGACCGTGGCCGAGAGCCTCGATCAGGCGCTGGAAGCGCTGGATGCCGATCGCAGCTT
CCTGACCGAGGGCGGCGTCTTCACCGACGAGACGATCGATGCCTACATCGAGCTCAAGTCCGAGGACATCGAGCGTCTGC
GCATGACGACCCACCCGATCGAGTTCGACATGTACTACAGCTGCTGA

Protein sequence :
MSDKTLALIEEHDVKWVDLRFTDTKGKEQHVTIPARDVDEEFFENGQMFDGSSINGWKGINESDMILRPEDGTGFLDPFT
EDATLVLRCDIIEPATMQGYERDPRSIAKRAEAYLQSSGLGDTAFFGPEPEFFVFDEVHWKADAEGAMYKITSEEGAWAT
DRHVEGGNLGHRPRVKGGYFPVPPVDSFHDIRGVMCSTLEAIGQTVEVHHHEVSNAGQNEIGVKFNTLVKKADELQEMKY
VVHNVAHAYGKTATFMPKPVVGDNGSGMHVHQSFWKDGQNQFAGDEYAGLSEMALYYIGGIIKHARALNAFTNASTNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYTASPKGKRIEARFPDPTANPYLCFAAMLMAGIDGIKNKIHPGDAMDKNLYDLP
PEEGKAIPTVAESLDQALEALDADRSFLTEGGVFTDETIDAYIELKSEDIERLRMTTHPIEFDMYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-109 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA1 YP_003896194.1 glutamine synthetase VFG1399 Protein 6e-108 50