|
Name : gabD3 (HELO_2175) Accession : YP_003897244.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1344492 - 1345964 bp Length : 1473 bp Strand : + Note : - DNA sequence : ATGGAAGCCCTGAAGGAGAATCTGAAGGAAACCCAACTGTATTGCCCCTTCGCCTACATCGACGGGAGTTGGGTCGCCGC CGACAGTGGCGAGCAGATCGAGGTGGTCAACCCGGCCACGGGCGATGTCGTCGGGAGTGTACCGCGCCTGGGGCGGGCGG AAACCGAGCGGGCCATCGCCGCTGCCGACGCCGCCCTGCCTGCCTGGAAGGCCTTGACTGCTCTGGAGCGCGCCGATGCG CTGATGAAGTGGCATGACCTGATGCTCGAGCATCAGCAGGACCTGGCCACCATCATGACCCACGAGCAGGGCAAGCCCTT GAAGGAAGCCGCAGGCGAGATCGCCTATGCGGCAAGCTTCTTGCGCTGGTTCGCGGAGCAGGCCCGTCGTATCAACGGCG AAACGGTACCGGCCGCTTCCAGCAACCAGCGTATCGTGGTCACCAAGCAGCCGGTGGGCGTGGTGGGGGCCATCACGCCC TGGAACTTCCCGGCCGCGATGATCACCCGCAAGGCCGGTGCGGCCCTGGCCGCGGGCTGTACCTTCGTGGTCAAGCCGGC CAGCCAGACGCCGTTCTCGGCCACCGCTCTGGCCATGCTCGCCGAACGTGCCGGCATTCCGCGCGGTGTGTTCAACGTGG TGCCCGGTCGCGCCTCGCAGATCGCCGCCGCCCTGACCGAATCACCGATCGTGCGCAAGATCACCTTCACCGGCTCCACC GAAGTGGGGCGTGAGTTGATGGCTCAGGCCTCGCGCCACGTGCAGAAGATCTCGCTGGAGCTGGGCGGCAATGCGCCCTT CATCGTCTTCGAGGACGCCGATCTGGATGCCGCCGTGGAAGGCGCCATGGCGGCCAAGTTCCGCAATGCTGGCCAGACCT GCGTGTGCACCAACCGTTTCCTGGTGCAGTCGAGCGTGGTCAATGCCTTCTGCGAAAAGCTGGCGGTGGCCATGAACAGC GAGCTCAAGGTTGGCGACGGCACGAAGGAGGGCGTCAACATCGGCCCGCTGATCGACGAGAAGGCCGTGGAGAAAGTCTC CGAACACGTTCAGGACGCCGTCGAGCACGGCGCCGAATTGCTGCTGGGCGGCCATCCGCATCCGCTGGGCGGCAACTTCT TCACCCCGACGCTGATCACCGAAGCCAACGATGGTATGAAGGTGGCCGGCGAGGAGACCTTCGGCCCGTTGGCCGCCGTC TTCCCCTTCGAGGACGAAGAGGACGCCGTGCGCATGGCCAACGACACCGAATATGGCCTGGCCTCCTACTTCTACTCCCG CGACCTGGGGCGCGTGTGGCGCGTGGCCGATGCGCTGGAATACGGCATGGTGGGCATCAACACCGGGTTGATTTCCAACG CCGCCGCCCCCTTCGGTGGCGTCAAGGCCTCGGGGCTCGGCCGCGAAGGCGGCCACCAGGGCATCGAGGAATTCCTCGAG ACCAAGTACCTGTGTATCGATCTCGGAGCCTAA Protein sequence : MEALKENLKETQLYCPFAYIDGSWVAADSGEQIEVVNPATGDVVGSVPRLGRAETERAIAAADAALPAWKALTALERADA LMKWHDLMLEHQQDLATIMTHEQGKPLKEAAGEIAYAASFLRWFAEQARRINGETVPAASSNQRIVVTKQPVGVVGAITP WNFPAAMITRKAGAALAAGCTFVVKPASQTPFSATALAMLAERAGIPRGVFNVVPGRASQIAAALTESPIVRKITFTGST EVGRELMAQASRHVQKISLELGGNAPFIVFEDADLDAAVEGAMAAKFRNAGQTCVCTNRFLVQSSVVNAFCEKLAVAMNS ELKVGDGTKEGVNIGPLIDEKAVEKVSEHVQDAVEHGAELLLGGHPHPLGGNFFTPTLITEANDGMKVAGEETFGPLAAV FPFEDEEDAVRMANDTEYGLASYFYSRDLGRVWRVADALEYGMVGINTGLISNAAAPFGGVKASGLGREGGHQGIEEFLE TKYLCIDLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-128 | 61 |
