Gene Information

Name : cobW (HELO_2030)
Accession : YP_003897099.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein/P47K family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 1182305 - 1183543 bp
Length : 1239 bp
Strand : +
Note : 47 kDa protein - Pseudomonas chlororaphis (Pseudomonas aureofaciens),InterPro: Cobalamin synthesis protein/P47K, High confidence in function and specificity

DNA sequence :
ATGACCCATGTTCAAGACCCGCTGCCGGTTACCGTGCTGTCGGGATTCCTGGGAGCCGGCAAGACCACTTTGCTCAACCG
CATCCTGGCCAATCGTGAAGGGCGGCGTATCGCCGTGATCGTCAATGACATGAGCGAGGTGAATATCGATGCCGACCTGG
TGCGCGGCGACGGGCGTGGCGATGTTGCGCTGAACCGTGCCGAGGAGCGCCTGGTCGAGATGAGCAATGGTTGCATCTGC
TGCACCTTGCGCGAGGACCTGCTGGAAGAAGTCGGGCGCCTGGCCCGGGAGGGGCGCTTCGATCAACTGGTGATCGAATC
CACCGGCATATCCGAGCCGTTGCCGGTGGCCGAGACCTTCACCTTCGAGGACGAACAGGGACGCAGCCTTTCGGATGTGG
CAAGGCTGGATACACTGGTCACGGTGGTCGATGGCGTGAATTTTCTCGAGCAGTATCGCCGGGCCGACTCGCTCGAGGAG
GCCGGGCAGAGCCTCGGCGAGGACGACGAGCGCAACCTGGCCGATCTGCTGGTCGACCAGGTGGAGTTCTGCGATGTCCT
GCTGATCAGCAAGGTCGACCTGCTCGAGGCCGAGCAACTGGTGGAACTCAAGGGCGTGCTGCGAGCCCTCAACCCGCAGG
CCGAACTGATCGCCATGCGCCATGGCGAGGTGCCGCTGGACAAGGTGCTCGATACCGGCCTGTTCAGTTTCGAGCGCGCC
AGTCAGGCACCTGGCTGGCTCAAGGAAATGCGTGGCGAGCACCAGCCGGAGACGGAAGAATACGGTGTATCGAGCTTCGT
CTACCGGGCGAGACGACCTTTCCACCCCCAGCGGTTCTTCGATCAGTTGCACGAGCGAGGTTTCGGCGACCGCTTGCTGC
GTTCCAAGGGCTTCTTCTGGCTGGCCAGTCGGCCGCGTCATGCCGGCCAGTGGAGCCAGGCCGGCGGCATTGCGCATTAC
GGCCTGGCGGGCATGTTCTGGAAGGCCATTCCGGAGGAGCACTGGCCCGATGAGCCGGCCTTTCGTCAACGCATCCTCGA
GAAATGGCAAGAGCCGTTCGGCGACATGCGCCAGGAACTGGTCTTCATCGGCCAGAACATGGACGAGGCCGAAATCCGGC
GTGCCCTGGACGATTGCCTGCTCGACGACGATCAGTTGCAGGCAGGGCTGGATGCCTGGCTTGCTCTGCCCGATCCGTTT
CCGAGCTGGAACATCGTCGATGAGCGGGAGGCATCATGA

Protein sequence :
MTHVQDPLPVTVLSGFLGAGKTTLLNRILANREGRRIAVIVNDMSEVNIDADLVRGDGRGDVALNRAEERLVEMSNGCIC
CTLREDLLEEVGRLAREGRFDQLVIESTGISEPLPVAETFTFEDEQGRSLSDVARLDTLVTVVDGVNFLEQYRRADSLEE
AGQSLGEDDERNLADLLVDQVEFCDVLLISKVDLLEAEQLVELKGVLRALNPQAELIAMRHGEVPLDKVLDTGLFSFERA
SQAPGWLKEMRGEHQPETEEYGVSSFVYRARRPFHPQRFFDQLHERGFGDRLLRSKGFFWLASRPRHAGQWSQAGGIAHY
GLAGMFWKAIPEEHWPDEPAFRQRILEKWQEPFGDMRQELVFIGQNMDEAEIRRALDDCLLDDDQLQAGLDAWLALPDPF
PSWNIVDEREAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 2e-85 53
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-84 52