Gene Information

Name : HELO_2013 (HELO_2013)
Accession : YP_003897082.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.1
Position : 1163485 - 1164714 bp
Length : 1230 bp
Strand : -
Note : InterPro: Aminotransferase class I and II, High confidence in function and specificity

DNA sequence :
ATGGACACAGCCCCACTCAAGAAATCGCACAAGCTCGACAGCGTCTGCTACGACATCCGCGGCCCGGTGCTCGAACACGC
CAAGCGACTGGAGGACGAAGGCCAGCGCATCCTCAAGCTGAATATCGGCAACCCCGCCCCTTTCGGCTTCGAGGCCCCCG
AAGAGATCCTTCAGGACGTGATGCGCAACCTGCCCACCGCCCAGGGGTACTGCGACTCAAAGGGGCTGTACTCGGCGCGC
AAGGCGATCATGCAGGAGTGCCAACGCAAGGAGATCCCCGGCGTCGGCATCGAGGACATCTACATCGGCAACGGCGTCTC
CGAGCTGATCGTGATGGCCCTGCAGGCGCTGCTCAACGATGGCGACGAACTGCTGATTCCGGCCCCCGACTATCCGCTGT
GGACGGCGGCGGCCAACCTCTCCGGCGGCCGCGCCGTGCATTACCTGTGCGATGAGCAGTCCGACTGGGCGCCGGACATG
GACGATATCCGCGCCAAGGTGACCAGCCATACCCGTGCCATCGTCATCATCAACCCCAACAATCCCACCGGCGCCGTCTA
TCCCCCGGAAGTGATCAGCGAATTGCTCGACATCGCCCGCGAGCACAACCTGGTGGTGTTCTCCGACGAGATCTACGACA
AGATTCTCTATGACGGCGTCGAGCATGTCGCCACCGGCTCCCTGGCCTCCGAGGACCAGCTGGTGGTGACCATGAACGGG
CTCTCCAAGAGCTATCGTTGCGCCGGCTTTCGCAGCGGCTGGATGACACTCTCGGGCACCCTGGCCAAGAAACGTGCCAG
CGACTTCATCCAGGGGCTGACCATGCTCGCCTCGATGCGCCTGTGCGCCAACGTGCCGGCCCAGCACGCCATCCAGACCG
CACTCGGCGGCTATCAATCGATCAACGACCTGATCCTGCCCGGCGGCCGGCTGCTCGCCCAGCGTGACATCACCTATGAA
AAGCTCAACGCCATTCCCGGCGTGAGCTGCACCAAGCCCAAGGGGGCGCTCTACGCCTTCCCGCGCCTGGACCCCAAGGT
CTTCAACATCCAGGACGACCAGCAAATGGTCCTCGACCTGCTGCTCCAGGAGAAGATCCTGCTGGTCCAGGGCAGCGCCT
TCAACTGGCCGGAGCCGGATCACGTGCGCATCGTCACCCTGCCCTGGGTCGACCAGCTCGACGATGCCCTGGAGCGCTTC
GCACGCTTCCTGTCACGTTATCGCCAATAG

Protein sequence :
MDTAPLKKSHKLDSVCYDIRGPVLEHAKRLEDEGQRILKLNIGNPAPFGFEAPEEILQDVMRNLPTAQGYCDSKGLYSAR
KAIMQECQRKEIPGVGIEDIYIGNGVSELIVMALQALLNDGDELLIPAPDYPLWTAAANLSGGRAVHYLCDEQSDWAPDM
DDIRAKVTSHTRAIVIINPNNPTGAVYPPEVISELLDIAREHNLVVFSDEIYDKILYDGVEHVATGSLASEDQLVVTMNG
LSKSYRCAGFRSGWMTLSGTLAKKRASDFIQGLTMLASMRLCANVPAQHAIQTALGGYQSINDLILPGGRLLAQRDITYE
KLNAIPGVSCTKPKGALYAFPRLDPKVFNIQDDQQMVLDLLLQEKILLVQGSAFNWPEPDHVRIVTLPWVDQLDDALERF
ARFLSRYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-116 58
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-116 58
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-116 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-116 58