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Name : kdsB (HELO_1983) Accession : YP_003897052.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonatecytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1132437 - 1133210 bp Length : 774 bp Strand : + Note : High confidence in function and specificity DNA sequence : ATGCAGGATTTCATCGTCGTGATCCCGTCGCGTTTCGCCTCCACGCGTCTGCCGGGCAAGCCGCTGCTGGATATTGCCGG AGAGCCGATGGTCGCCCACGTCTGGCGTCGTGCTTGCGCCAGTGCCGCCACCCGGGTGGTGGTGGCCACCGACGACGAGC GTATCCGCACCGCCTTCGATGGCCTGGATGCCGAGGTGGTGATGACCAGGAGCGATCATCCCTCGGGAACCGACCGCCTG GCCGAGGTGGCCGAGCGGCTGGCGTTGCCCGACGACGCCGTGCTGGTCAATGTCCAGGGCGACGAGCCGCTGATTCCGCC GGCCCTGATCGATCAGGTGGCCATGCGGCTGTTCGACGATCCCGGCGCTTCCATCTCCACCCTCGCCGAGTCGATCACCG AGGTCGAAACACTCTTCGATCCCAATGTCGTGAAAGTGGTGCGCGCGGCGTCGGGCAGGGCGCTCTACTTCTCGCGGGCG CCAGTCCCTTGGGATCGAGAGGCCTTCGCCGAGCGGCCCGAGTTGCTGTCGACCGATGCCTGGCTGAGACATATCGGTAT CTATGCCTATCGCGCGAGTTTTCTCGCCGAATATCGTGATTGGGCGCCGTCACCCCTGGAACAGCTCGAACAGCTCGAAC AGTTGCGCGCCCTGCACCATGGCCATGCCATCCAGGTCGGCCTGGCGCGGGAACCCAATCCGCCCGGCGTGGATACCGCC GCGGATCTCGAGCGGGTTCGCGAGTGGCTGAGCGCCGAGGGAGGAACGTCATGA Protein sequence : MQDFIVVIPSRFASTRLPGKPLLDIAGEPMVAHVWRRACASAATRVVVATDDERIRTAFDGLDAEVVMTRSDHPSGTDRL AEVAERLALPDDAVLVNVQGDEPLIPPALIDQVAMRLFDDPGASISTLAESITEVETLFDPNVVKVVRAASGRALYFSRA PVPWDREAFAERPELLSTDAWLRHIGIYAYRASFLAEYRDWAPSPLEQLEQLEQLRALHHGHAIQVGLAREPNPPGVDTA ADLERVREWLSAEGGTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 8e-38 | 43 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-37 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-37 | 43 |
