Gene Information

Name : Mpet_1925 (Mpet_1925)
Accession : YP_003895114.1
Strain : Methanoplanus petrolearius DSM 11571
Genome accession: NC_014507
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1942004 - 1942489 bp
Length : 486 bp
Strand : +
Note : COGs: COG1576 conserved hypothetical protein; InterPro IPR016051:IPR003742:IPR002034; KEGG: aoe:Clos_2775 rRNA large subunit methyltransferase; PFAM: protein of unknown function DUF163; SPTR: Ribosomal RNA large subunit methyltransferase H; PFAM: Predicte

DNA sequence :
ATGCCCCTGACTGTTTTGATAACCGGTGCAGGAAAGGTGAAAGAGCCTTTCCTCCGTGACGGAATACAGGAATACAAAAA
AAGACTTTCGGGCTATGTCAAAATTTCGCTGGAAGAGGTGCCTGACGAAAGTATCCCGCAGAATATGTCGGAGCAGGTGA
AACACAGGATACTTGATACCGAAGGCGAGAATATTTTAAAAAAAGTTAAAGACGACGATATCGTCGTTCTTCTCGACCTT
AAAGGCGATCTCTGGAATTCGGAGAGGCTTGCAGGCATTCTAAAGAATGCAGAACTCTCGACCTCAGGAAGGCTGGTCTT
CGTAATCGGAGGGACACTCGGAGTTTCAGATAAACTAATTAAGAGAGCTAACTACCGCTGGTGCCTCTCCCCGCTCACAT
TTCCCCACCAGATGGTAAGGCTCATTGTCCTCGAACAGCTCTTCAGGGCATGCAAGATTAACAGGGGAGAGGTTTATCAC
CGGTAA

Protein sequence :
MPLTVLITGAGKVKEPFLRDGIQEYKKRLSGYVKISLEEVPDESIPQNMSEQVKHRILDTEGENILKKVKDDDIVVLLDL
KGDLWNSERLAGILKNAELSTSGRLVFVIGGTLGVSDKLIKRANYRWCLSPLTFPHQMVRLIVLEQLFRACKINRGEVYH
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-25 43
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-25 43
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-25 42
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-25 42
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-25 42
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-25 42
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-25 42
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-25 42
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-25 42
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-25 42
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 2e-24 42
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-25 42
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-25 42
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-25 42
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-25 42
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-25 41
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 4e-24 41