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Name : Mpet_1680 (Mpet_1680) Accession : YP_003894871.1 Strain : Methanoplanus petrolearius DSM 11571 Genome accession: NC_014507 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1717466 - 1720498 bp Length : 3033 bp Strand : + Note : COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR007409:IPR006935:IPR014001:IPR004473:IPR 014021; KEGG: clo:HMPREF0868_0494 type I site-specific deoxyribonuclease, HsdR family; PFA DNA sequence : GTGACATTCACCGAAGCCGACTTTGAAAACTCCGTAATCGAGATCTTCCGGGACAACCTCGGCTATACATACCGGTACGG TCCCGAAGTAGACCGGGACTATCACAATCCGCTCTATGAAGAGCAGCTCCTCTCCTCCCTTGAAACAATCAACCCCAAAC TCCCCCAAACCGCCATCGAAGAAGCCGTCTACAAGCTCAAAAATATCGGAACAGGAACCCTCGTCCAGAAAAACTTCATC TTCACCGACTACCTCCAGAACGGAATCCCCGTAAAATACTACGACGGAAAAGAAGAACGTTCGGCCATCGTCTACCTCGT GGATTACCAAAACCCCGCGAACAACACATTCCACGTCATAAACCAGTGGACAGTCGTCGACGAAGTTGAAAAACGCCCCG ACATCGTCATCTTCGTAAACGGACTCCCTCTCGTCGTCGTCGAACTCAAATCCCCCTCACGCGAGGAGACCGACGTATCC GAGGCATACCGGCAGCTCAGGAACTATCTCCACGACATCCCCTCCCTCTTCGTCTACAACGCATTCTGCGTTATGAGCGA TCACGCGACATCCAAGGCGGGAACAATCACGGCAGACGAAGACCGCTACATGGAATGGAAGACAGTCGACGGAAGCTACG AGAACACCCAGTATGCAGCATTCGACGTCCTCTTCGAGGGAATATTCGAAAAAGAAAGATTCCTTGACATCCTCAAAAAC TTCATCTGCTTCTCGAAGGAAACCCCCGAAGACAAAAAAATTCTCGGGGCCTACCACCAGTACTTCGCCGTAAAAAAGGC CCTCCAGTCCACAAAAGAAGCAACCCTCACAGACGGAAAAGGAGGAGTCTTCTGGCACACGCAGGGAAGCGGAAAGTCAC TATCAATGGTCTTCTACGCAAAACAGCTCCGGGAAGTCCTCGACAGCCCGACAATAGTCGTAATCACCGACCGAAACGAC CTTGACGGCCAGCTCTTCGGCCAGTTTTCGGCATGCGAAGACTACCTGAGACAGACACCCGTCCAGGCCGAAAGCAGGGC CGACCTTAAAATGCTCATCCTGAACCGGGAGGTAAACGGCATCATCTTCACCACGATGCAGAAGTTCGAGGAGTACGACG CCCCGCTATCCAAACGAAGAAACATAGTCGTAATCGCAGACGAAGCCCACCGGAGCCAGTACGGGTTCGAAGAAAAAGTC CACCCGAAGACCGGCAAAATCCGGATCGGGTCCGCCAGGAAGGTAAGAGACAGCCTCCCCAACGCCACATACATAGGATT CACCGGAACCCCCGTCTCCCTCGCCGACCGCAACACCCGGGAGATATTCGGCGACTACATCGACATATACGACATGACCC AGTCGGTCGAAGACAATGCAACCGTCCCCATATACTACGAAAGCAGGGTCGTCGCCCTCAAACTGGACGAAAGCATCCTT CATGAGATCGACGATGAATACGACCGCGTCGCAGAAGAAGCCGAAGAATATATCGTCGAAAAAAGCAAGCACGAACTCGG CCGGCTTGAAAGCATACTCGGGGCGCCTGAAACAATCACGACCCTCTGCGAGGATATCATAAAACACTACGAGACCTACA GGCAGTACGAGCAGACCGGAAAAGCGATGATCGTCGCCTATTCAAGACCAATCGCCATGAAAGTCTACCGGCGCATTCTC GAACTCAGACCGGAATGGAAAGAAAAACTCGGCGTCGTCATGACTTCCGACAACAACGACCCCGAAGACTGGCGGGAGGT CATCGGCAACAAGAAGCACAAAGAAAACATGGCGGGGAAGTTCAAGGACAACAACGATCCCTTAAAGATCGCGATCGTCG TCGACATGTGGCTGACAGGCTTCGACGTCCCCTCCCTCTCCACGATGTACGTCTACAAACCGATGACCGGCCACAACCTC ATGCAGGCCATAGCCCGCGTAAACCGCGTCTACAAGGACAAGCAGGGCGGCCTCATAGTCGATTACGTAGGAATCGCAGG CGCCCTCCGGAAAGCGATGAAAGACTACACCGGCCGCGACCGGAAGAACTACGGCAACCCCGACATAGGAAAGACAGCAT ACCCGAAATTCCGTGAAAAGCTGGAAGTATGCCGCGACCTCTTCCACGGCTTCGACTATTCCGTGTTCGAAACCGGCACC GACCTTGAGAGGGCGAAACTCATCACCGGCGGAGTAAACTACATCTCCCATCCCTCAAAAGAAGAGAAAAGAAACGCATT CGTCAGGGAATCACTCCTCCTCCGCCACGCAATGTCCCTCTGCCGCAGCCTGCTCGATCAGAACGAAAGATTCGAGGCGG CATATTTCGAAGCCGTAAGAACACTTCTCACCAGGATCGAAGGGAAAGGGAAACTCTCGCTGAGAGAGATAAACAACCGC ATAAACGAACTCTTAAAGCAGAGCATCCGGAGCGAGGGCGTGATAAACCTCTTCTCGGACGTAAAAGAAAAATATTCCCT CTTCGACCCCGCGTTCCTCTCCGAGATCGCCCGGATGAAGGAGAAGAACCTCGCGGTGGAGCTGCTCAAAAAACTGCTCA TGGAACAGATCAGGGTCTATTCAAGGACGAATGTAGTTAAATCCGCGAAGTTTTCAGAACTCCTGGCAGAAGCGATGAAC AGCTACATAAACGGCATGTTGACAAACGAGCAGGTCATTGAAGAGCTGCTCAAAATAGCAAAGGATATGGCTGAGGCCCA TAAAGAGGGAGAAGAGCTCGGCCTTAATCCCGAAGAGATGGCATTCTACGATGCCCTGACAAAACCGGAAGCCGTCAAAG ACTTCTACGAAAACGACGAACTTGTCGCGATCACGAAAGAGCTGACCGAACTTCTGCGGAAGAACAAAACAATCGACTGG CAGAAGAAAGAGACGGCGAGGGCAGGCATGAGAAGACTCGTCAAGCGCCTGCTGAAACAGCACAAGTACCCTCCTGAAGG AATGGAGGACGCCGTAAGCACGGTCCTTGCCCAGTGCGAGATGTGGACCGACAACACGGAATTTGACGAGTGA Protein sequence : MTFTEADFENSVIEIFRDNLGYTYRYGPEVDRDYHNPLYEEQLLSSLETINPKLPQTAIEEAVYKLKNIGTGTLVQKNFI FTDYLQNGIPVKYYDGKEERSAIVYLVDYQNPANNTFHVINQWTVVDEVEKRPDIVIFVNGLPLVVVELKSPSREETDVS EAYRQLRNYLHDIPSLFVYNAFCVMSDHATSKAGTITADEDRYMEWKTVDGSYENTQYAAFDVLFEGIFEKERFLDILKN FICFSKETPEDKKILGAYHQYFAVKKALQSTKEATLTDGKGGVFWHTQGSGKSLSMVFYAKQLREVLDSPTIVVITDRND LDGQLFGQFSACEDYLRQTPVQAESRADLKMLILNREVNGIIFTTMQKFEEYDAPLSKRRNIVVIADEAHRSQYGFEEKV HPKTGKIRIGSARKVRDSLPNATYIGFTGTPVSLADRNTREIFGDYIDIYDMTQSVEDNATVPIYYESRVVALKLDESIL HEIDDEYDRVAEEAEEYIVEKSKHELGRLESILGAPETITTLCEDIIKHYETYRQYEQTGKAMIVAYSRPIAMKVYRRIL ELRPEWKEKLGVVMTSDNNDPEDWREVIGNKKHKENMAGKFKDNNDPLKIAIVVDMWLTGFDVPSLSTMYVYKPMTGHNL MQAIARVNRVYKDKQGGLIVDYVGIAGALRKAMKDYTGRDRKNYGNPDIGKTAYPKFREKLEVCRDLFHGFDYSVFETGT DLERAKLITGGVNYISHPSKEEKRNAFVRESLLLRHAMSLCRSLLDQNERFEAAYFEAVRTLLTRIEGKGKLSLREINNR INELLKQSIRSEGVINLFSDVKEKYSLFDPAFLSEIARMKEKNLAVELLKKLLMEQIRVYSRTNVVKSAKFSELLAEAMN SYINGMLTNEQVIEELLKIAKDMAEAHKEGEELGLNPEEMAFYDALTKPEAVKDFYENDELVAITKELTELLRKNKTIDW QKKETARAGMRRLVKRLLKQHKYPPEGMEDAVSTVLAQCEMWTDNTEFDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 43 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 43 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 43 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 2e-170 | 41 |
