Gene Information

Name : Saut_1878 (Saut_1878)
Accession : YP_003892934.1
Strain : Sulfurimonas autotrophica DSM 16294
Genome accession: NC_014506
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1870524 - 1871954 bp
Length : 1431 bp
Strand : +
Note : COGs: COG0174 Glutamine synthetase; InterPro IPR008146:IPR008147:IPR002345:IPR004809; KEGG: sun:SUN_0353 glutamine synthase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: P94845 Glutamine synthetase; TIGRFAM: glutamin

DNA sequence :
ATGGGAAAATTCGTTAATAATATAGAAGAGTTCTTTACATTTTGTAATGAAAATGATGTACAATTTGTAGATTTAAGATT
TAGTGATATTAAAGGTGCATGGCATCACCTTTCATACCGTTACAGTGCAGTAAATGCAGAAAATTTAGAAAATGGTTTTC
CTTTTGACGGTTCTTCAGTTGAAGCTTGGCAGCCAATCAATAAGTCAGATATGATTTTAAAAGCTGATGTACCTACCGCG
TTTCTTGATCCTTTTACTGCTGATCCTACTGTTATTCTTATCTGTGATGTATATGATATTTATAAAAATGAACTGTATGA
GAGATGTCCGCGTTCTATCGCAAAAAAAGCATTAAAACATGCTGAAGATATCGGAATTGCCGATGCTGCATACTTTGGTC
CGGAAAATGAATTTTTCATCTTTGATGATGTGAAGTTTGTTGACAATATCAACGAAATGGGATTCAAAGTAGATACGGAA
GAAGGTGAATGGAATTCAAACACTTCTTATGATGATATGTACAATACTGGTCACAGACCGGGAACTAAAGGCGGTTACTT
TCCTGTAGCTCCAACAGACTCTATGGTGGATATGCGTGCTGAAATGATGCAGGTTTTAGAACAAGTCGGTCTTGAAGTTA
TTCTTGGGCACCATGAAGTTGCACAGGGTCAAGGTGAAATTGGAATCGTGTTTGGTGATATCATCACTGCAGGTGACAAT
GTTCAAAAATACAAGTATGTTGTAAAAATGATTGCACACCTTAATGGTAAAACTGCTACATTCATGCCAAAACCTCTTTA
TGGTGATAACGGAAACGGTATGCACGTACACCAATCACTTTGGAAAGACGGTAAAAACCTTTTCTATAAAGAAGGAAATT
ATGGTAATCTAAGTGAAATGGCTCTTCACTATACAGGCGGTATCTTTAAACATGCTGCTGCAGTTGCTGCATTTACTAAC
CCGACAACCAACTCATACAAGCGTCTGCTTCCTGGTTTTGAAGCACCAAGTATCTTGACATACTCTTCTCAAAACCGCTC
TGCTGCTTGTCGTATTCCATATGGAGCGGGCGAAAAGGCTACACGTATTGAAATGAGATTTCCAGATTCTTCTGCTTGTC
CTTACCTTGCATTTGCCGTAATGATGATGGCTGGACTTGACGGTATCAAACATAAAGACGTACCTACAGGACCGATGGAT
ATCGATTTATTTGAGCTTTCTTTAGATGAAATTCGTGAAAAAGGTATTGTTCAAATGCCACACACACTTCGTGAAGCATT
AGAAGCTCTCATCGCTGATAATGAATTCTTAAAACCGGTATTCACAGCAGACTTTATAGATGCTTATCAGCACTACAGAT
TTGAACGTTGTGTTTTTCCTGACGAGGGTCGTCCTACTGCTTACGAGTTTAAAACTACGTACCAGTGCTAA

Protein sequence :
MGKFVNNIEEFFTFCNENDVQFVDLRFSDIKGAWHHLSYRYSAVNAENLENGFPFDGSSVEAWQPINKSDMILKADVPTA
FLDPFTADPTVILICDVYDIYKNELYERCPRSIAKKALKHAEDIGIADAAYFGPENEFFIFDDVKFVDNINEMGFKVDTE
EGEWNSNTSYDDMYNTGHRPGTKGGYFPVAPTDSMVDMRAEMMQVLEQVGLEVILGHHEVAQGQGEIGIVFGDIITAGDN
VQKYKYVVKMIAHLNGKTATFMPKPLYGDNGNGMHVHQSLWKDGKNLFYKEGNYGNLSEMALHYTGGIFKHAAAVAAFTN
PTTNSYKRLLPGFEAPSILTYSSQNRSAACRIPYGAGEKATRIEMRFPDSSACPYLAFAVMMMAGLDGIKHKDVPTGPMD
IDLFELSLDEIREKGIVQMPHTLREALEALIADNEFLKPVFTADFIDAYQHYRFERCVFPDEGRPTAYEFKTTYQC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-148 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saut_1878 YP_003892934.1 glutamine synthetase, type I VFG1399 Protein 1e-91 47