Gene Information

Name : Saut_1524 (Saut_1524)
Accession : YP_003892583.1
Strain : Sulfurimonas autotrophica DSM 16294
Genome accession: NC_014506
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1512567 - 1513973 bp
Length : 1407 bp
Strand : -
Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: tdn:Suden_1486 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Q30QG8 Thiamine biosynthesis protein thiC; TIGRFAM: thiamine biosynthesis protei

DNA sequence :
ATGAGATCTTCATGGGTAAAAGAGCGTGAGGGTGATTCTGTAAGAACACAGATGCACTACGCAAAAAAAGGCATCATCAC
GCAAGAGATGGAATATGTCGCAAAAATAGAAGATTTATCTCCTGAACTGGTTCGTAGTGAGATAGCTCGCGGTAGATTAA
TTATACCGGCGAATGTAAATCATACATCATTAGAGCCAATGGCCATAGGAATTGCAAGTAAATGTAAAATAAATGCAAAT
ATTGGCTCTTCTGCAATAGCTTCTGATGTGCAGGGTGAAGTCCAAAAGATGCAGGTATCTCAACATTATAAAGCAGATAC
GGCAATGGATCTCTCAACCGGTGGAGATTTGGATGAAATTAGAAAAGCGGTTATTGCTTCTTCAAAGATTCCTATCGGAA
CGGTGCCTATTTATCAGATTTTACATGATGTCGGGAATAAAATAGAAGATTTAAGTATCGAAGTAATGCTTGAAGTTTTA
GAGCGTCAGGCACAGCAGGGTGTTTCTTACTTTACAATTCACGCCGGTTTCTTGTTAGAGACGATGCCTAAAGTTGCAAA
GCGTAAAATGGGTATCGTTTCTCGCGGTGGTTCGCTGATGGCTGCATGGATGATGCACTACCATAGAGAAAATCCTTTTT
ACAGTGCATTTGATGATATTTTAGAAATTTGTGCAAAGTATGATGTTTCTTTGTCTCTTGGAGATTCCCTTCGTCCCGGT
TGTCTGGCAGATGCTAGTGATGATGCACAGCTTGGCGAGCTAAAAGTTCTTGGTGAGCTTACACTTAGAGCCTGGGAAAA
AGATGTGCAGGTTATGATTGAAGGTCCTGGACATGTGCCTTTGAATCAGATAGAGCGCAATATGAAGATTCAAAGAGAGT
TATGCCATGAAGCACCTTTCTATATTTTAGGGCCGCTTGTAACAGATATTGCTGCAGGATATGACCATATTTCTTCTGCT
ATCGGTGCGGCTGTTGGTGGATGGCACGGGGCAAGTATGCTTTGTTACGTAACACCAAAAGAACACTTAGGTCTTCCAAA
CGCTGATGATGTACGTGAAGGTATCATTGCTTATAAAATCGCAGCACATGCTGCCGATATTGCCCGTGGACGTAAAGGTG
CAAGAGATGTTGATGATGCAATGAGCGATGCCCGTTATGCATTTGACTGGGAAAAACAGTTTGAGTTGGCGCTTGATTCT
GAACGTGCTCGTGAGTACCATGATGAGACACTGCCTCAAGATGTATTTAAAGAAGCAGAATTTTGTTCTATGTGCGGACC
GAAATTTTGTTCTTACAAAATAACACAAGAGATTATGGACAATCCTGAAGGAATTGAGCGAATCATTCAGGACAATAAAG
ACAAAGAAGAGGCGGAAGCTAAAGCTGAGGCTGAAGCTTTAGTATAA

Protein sequence :
MRSSWVKEREGDSVRTQMHYAKKGIITQEMEYVAKIEDLSPELVRSEIARGRLIIPANVNHTSLEPMAIGIASKCKINAN
IGSSAIASDVQGEVQKMQVSQHYKADTAMDLSTGGDLDEIRKAVIASSKIPIGTVPIYQILHDVGNKIEDLSIEVMLEVL
ERQAQQGVSYFTIHAGFLLETMPKVAKRKMGIVSRGGSLMAAWMMHYHRENPFYSAFDDILEICAKYDVSLSLGDSLRPG
CLADASDDAQLGELKVLGELTLRAWEKDVQVMIEGPGHVPLNQIERNMKIQRELCHEAPFYILGPLVTDIAAGYDHISSA
IGAAVGGWHGASMLCYVTPKEHLGLPNADDVREGIIAYKIAAHAADIARGRKGARDVDDAMSDARYAFDWEKQFELALDS
ERAREYHDETLPQDVFKEAEFCSMCGPKFCSYKITQEIMDNPEGIERIIQDNKDKEEAEAKAEAEALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-114 58
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-114 58
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 6e-111 56