|
Name : Saut_1486 (Saut_1486) Accession : YP_003892545.1 Strain : Sulfurimonas autotrophica DSM 16294 Genome accession: NC_014506 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1468661 - 1470394 bp Length : 1734 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR002225:IPR003869:IPR005913:IPR002198:IPR 001509; KEGG: abu:Abu_0696 sugar epimerase/dehydratase; PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomeras DNA sequence : ATGAATATAGATAAACGAATACTAAATTTTTTAGTCATAATTGTTTTAAGTTTTATAACGTTCGTGTGGACTTTTTTTAT ATTTCATATACCATTTGATTTTACGGTTGTTATTAGTGTTATATTTATACGTATGTTGGCATCTGCTTTTATACTTAAAG ATTATTCACTTTCTTGGTCGAAGGCATCGCAAAAAACATTTTTAATTAAGAGTATTGTATATGTTATTGCATTTGTAGTG TATATGCCACTGTATTATGGAAAGATTTCTATTTCGTTTTTTGTTTCTGAACTTTTTTTATATATTTTTGCAATCAATTT TTTAATGTACTTTTACTACTATATTATAAACAGAAATGATGTGAAAAAGACGAAGTCTGTTGTGATTTACGGAGCAGGAA AGGCCGGTATAAAACTTGAGAGCGAGTTTGCAAATACGGAATATAAAGTGAACTATTTTGTGGATGACAATAAGATTATT CAGGGGCGCTCCATTGATTCTGTGGCTGTACTTTCTAAACAAAAACTCAAAAAAATCATAGGAAATGAAAAAAAGTTTAA TTTGCTGGTAATTGCCATGCCTTCTGCTCCAAAAGAGAGAATAAAAGAGATATATGAAGACCTCTCGGCTTATTTTCAAG AGATAAAAATCCTTCCTTCTATGGATGAGATACTTAAAGATAAAGATTTTTCCACACAGCTTAAAAACATCTCTGTAGAA AATTTACTTGCGCGTAATCCCAAGGATTTGGACAAAAACAAGATTGAAGAGTTCATAAAAGATAAAACTGTTTTAGTAAC TGGTGCAGGTGGAAGCATCGGGAGTGAGATATGCAGACAGTGTGAAAAGTATGGAGCAAGAAAACTGATACTTTTGGATC ACAGCGAATATAATCTTTACGCTATTTTGGAAGAATTGAAAAATGTGGATGTTGAGCCTGTTATGCAGAGTGTTATAAAT GTAGAGCATTTGGATGAGACTTTTGCAAAGTATCAGCCGGATCTTGTCATTCATGCTGCTGCGTACAAGCATGTACCTTT GGTTGAATCGAACATTTATGAAGGTATATTGAACAATGTAGTGGGTACGAAAAATGTCATAGATACATCCATAAAGTATG GTGTGCAAAAATTTGTAATGATTTCAACAGACAAAGCAGTACGCCCTACAAATGTTATGGGAACAACAAAGCGTATTTGT GAGTTGTATGCACAAAATTCTAACGGGCAGGGCACGGACATCGTGGCTGTTCGATTTGGAAATGTGCTAGGAAGTAGTGG AAGTGTAATACCGAAGTTTAAATCTCAAATTCAAAACGGGCAAAATATTACTGTGACACATCCCGACATTACCCGCTACT TTATGCTGATTCCTGAAGCGTGTGAACTGGTGCTTCAAGCCGGAGCTATAGGAACGGGCGGCGAGATATTTATACTTGAT ATGGGAGAGCCTATCAAAATAGTTGATTTGGCAAAAAAGATGATAGAACTAAGTGGGAGAGAAGACATCAAAATAGAGTT TAGCGGCTTACGTCCCGGTGAAAAACTCTATGAGGAACTGCTAATAGATGACAGCGACGTACAAACGGAATATGAATCTA TAACAGTGGCACAACCGACAGCATATAACTTGAAAAAATTAAACCAAGATATAGAAGAACTACTTACATGTAAAGACAAG CTGAAAAAACTTAAAGAGATTGTGCCTGAGTTTAATCACCAGACAAACAAGTAG Protein sequence : MNIDKRILNFLVIIVLSFITFVWTFFIFHIPFDFTVVISVIFIRMLASAFILKDYSLSWSKASQKTFLIKSIVYVIAFVV YMPLYYGKISISFFVSELFLYIFAINFLMYFYYYIINRNDVKKTKSVVIYGAGKAGIKLESEFANTEYKVNYFVDDNKII QGRSIDSVAVLSKQKLKKIIGNEKKFNLLVIAMPSAPKERIKEIYEDLSAYFQEIKILPSMDEILKDKDFSTQLKNISVE NLLARNPKDLDKNKIEEFIKDKTVLVTGAGGSIGSEICRQCEKYGARKLILLDHSEYNLYAILEELKNVDVEPVMQSVIN VEHLDETFAKYQPDLVIHAAAYKHVPLVESNIYEGILNNVVGTKNVIDTSIKYGVQKFVMISTDKAVRPTNVMGTTKRIC ELYAQNSNGQGTDIVAVRFGNVLGSSGSVIPKFKSQIQNGQNITVTHPDITRYFMLIPEACELVLQAGAIGTGGEIFILD MGEPIKIVDLAKKMIELSGREDIKIEFSGLRPGEKLYEELLIDDSDVQTEYESITVAQPTAYNLKKLNQDIEELLTCKDK LKKLKEIVPEFNHQTNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-73 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Saut_1486 | YP_003892545.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 3e-77 | 43 |
