Gene Information

Name : Saut_1029 (Saut_1029)
Accession : YP_003892090.1
Strain : Sulfurimonas autotrophica DSM 16294
Genome accession: NC_014506
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1012343 - 1013194 bp
Length : 852 bp
Strand : +
Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: rms:RMA_0746 transposase; PFAM: Integrase catalytic region; SPTR: A3XG72 Transposase-like; PFAM: Integrase core domain

DNA sequence :
ATGAACTTCAATATTACAGTAATGTGCAAAGTTTTAAAAGTTGACAAATCAAGCTTTTATCATTGGATAAAAGCGGGTTG
TATTGTTAAAAAAGTTGATGAAAAGCTCAATGAACTCATAGAAATAATATTTGTTCAAGGAAGGCAGAACTACGGTACAA
GACGCATCAAAGAGAAACTGAAACAAAGATATGGATTTCTTGTTTCAAGACGCCGTATAGGCGATATTATGAAGGACTTG
GGGCTTGTCGCAAAGACCAAAAAGCGATATAAAATCAATACAACAAATTCAAATCACAATCTACCAATTGCACCCAATCT
CTTAGAGAGAGATTTTTATGCTTCTACTCCAGATGAGAAATATGTTGGAGATATAACTTATATTCCAACAAATGAAGGCT
GGCTCTATTTAGCCACTGTCATAGATTTGTACTCAAGACGAATAGTCGGTTGGTCAATGGATGATACCATGAAAGTTTCA
CTTGTAAATGATGCCCTAAATATGGCATTAATCAGCCGAAAACCGCCAAAAAGTTTAATTTGGCATACAGATAGAGGCAG
CCAATATGCTTCTTATGCGCATAAAGATTTATTGCAAAAATATGGAATCGTTCAAAGCATGTCAAGAAAGGGTAATTGTT
GGGATAACGCAGTAGCAGAGAGCTTTTTTCATACCTTGAAAACTGAACTTGTTTACCATGAGATTTATGAAACAAAATCT
CAAGCTAATCAGAGTATTTTTGAATGGATTGAAGTTTATTACAATAGACAAAGGATGCATAGTTCAAATAATAATTTGTC
ACCTGTCGAGTTTGAAGAAAAAATGATGTTACAGGTTGAAACAGCAGCTTAG

Protein sequence :
MNFNITVMCKVLKVDKSSFYHWIKAGCIVKKVDEKLNELIEIIFVQGRQNYGTRRIKEKLKQRYGFLVSRRRIGDIMKDL
GLVAKTKKRYKINTTNSNHNLPIAPNLLERDFYASTPDEKYVGDITYIPTNEGWLYLATVIDLYSRRIVGWSMDDTMKVS
LVNDALNMALISRKPPKSLIWHTDRGSQYASYAHKDLLQKYGIVQSMSRKGNCWDNAVAESFFHTLKTELVYHEIYETKS
QANQSIFEWIEVYYNRQRMHSSNNNLSPVEFEEKMMLQVETAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-53 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 6e-52 45
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-53 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 4e-53 45
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-53 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-53 45
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 3e-53 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-53 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 5e-53 45
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-33 44
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-33 44
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-33 43
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-33 43
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-37 43
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-37 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-49 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-49 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-33 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-33 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-35 42
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-46 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 8e-43 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-43 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-43 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-49 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-32 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saut_1029 YP_003892090.1 integrase catalytic subunit VFG1706 Protein 2e-53 45
Saut_1029 YP_003892090.1 integrase catalytic subunit VFG0785 Protein 8e-34 43
Saut_1029 YP_003892090.1 integrase catalytic subunit VFG1631 Protein 4e-46 41
Saut_1029 YP_003892090.1 integrase catalytic subunit VFG1484 Protein 2e-32 41