Gene Information

Name : Cyan7822_0695 (Cyan7822_0695)
Accession : YP_003886002.1
Strain : Cyanothece sp. PCC 7822
Genome accession: NC_014501
Putative virulence/resistance : Unknown
Product : HsdR family type I site-specific deoxyribonuclease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 756720 - 759803 bp
Length : 3084 bp
Strand : +
Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: aba:Acid345_3755 HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase

DNA sequence :
ATGAAACCTAACTTTTCTGAATCTGTTGTTGAAGATGCGACCCTAGCTTGGTTTGAATTATTAGGCTACACCGTTTGCCA
CGCTTCAGAACTTGACAGACAAAGCTACAGTGACATTATCCTAACTGATTCCCTTCAAACTGCCTTAAAAAAAATTAACC
CTCAAATTCCCTCCGAAACTCTCCAAGAAGTCATCAAAAAAATTACCCGTAGCGACACCCCCAACCTCATCGAAAATAAC
CTGCGCTTTCATAAACTCCTCACCGATGGGGTAGATGTAGAATATCAACAAGACGGACGCACCAAATACGATAAAGTCTG
GTTAATCGACTTCAAGCATCCCGAAAATAACCAATATTTAGCCGCTAATCAACTTACCGTCACCGAAGGCAAAAATACCC
GCCGTCCCGATGTCGTCATCTTCATCAACGGTTTACCCATCGCGGTTATCGAACTCAAAAATCCTGCCGACGAAAACGCC
ACTATTACAGGCGCATTTAACCAACTGCAAACCTATAAACAAGAAATACCCTCTCTTTTCTCTACCAACGAACTCTTAAT
CATCTCAGACGGAACAGAGGCTAGAATCGGCACATTAACCGCAGATTGGGAACGATTCGCCCCTTGGCGTACCGTAGACG
GAGAAAATATCGCCCCTAAACGAGTTGCAGAATTAGAAACCCTTATTCGCGGCGTATTCCCTCCCAAAACCCTCCTAGAC
ATACTACAATCATTCATCGTCTTTGAAACCGACGGCGACACCATCACCAAAAAACTCGCCGGATATCATCAATATCATGC
TGTTAATAAAGCCATTACTGCTACTTTAGAAGCTACCCATCCCCAAGGCGATAAAAAAGTCGGTGTGGTTTGGCATACTC
AAGGAAGCGGAAAAAGCCTCACAATGGCATTCTACGCCGGTAAAATCATTCAACAGCCCGAAATGGCTAACCCTACCCTC
GTTATCCTCACCGATAGAAACGATTTAGATGACCAATTATTTAACACCTTCTCTCTGTGTACCGACTTATTACGCCAAAC
CCCCACACAAGCGGAAAGTCGAGAACAGTTACAGGAATTATTAAAAGTCGCCTCTGGTGGTGTCATTTTCACTACTATTC
AGAAATTCTCTCCCGAATACGGCAATCAATACCCTTTACTTTCCAATAGACGCAATATTATTTTAATCGCTGATGAGGCA
CACCGTAGTCAATACGGATTAGAGGCTAAAGTCATTAATAAACAAGAAGAAGCTTATATATCCTACGGATTCGCTAAATA
TTTGAGAGATGCCCTACCAAATGCCTCTTTTATCGGCTTTACAGGAACTCCCATTGAAGCTGGAGATATTAACACCCCTG
CTGTTTTTGGAGACTATATCGATATTTACGACATCCAACGCGCCGTAGAAGATGAAGCCACCGTTAAAATTTATTATGAA
GGCAGACTCGCCAAAATAGATCTAGAACCCTCAGAAAGACCCAATATCGACCCCAATTTTGAAGAAGTCACCGAAGACGA
GGAAACCACTACTAAAGAGAAGTTAAAAAGTAAATGGGCAAGATTAGAAGCATTAGTCGGGGCAGAAAAACGGATTAATC
AAATTGCCCAAGATATTGTTACCCATTTTGAGAACCGGTTAGCCAGCATAGACGGTAAAGCGATGATAGTCTGTATGAGT
CGCCGTATCTGTGTTGACCTCTACAACGCCATTATTAAACTTAAACCCGACTGGCATCATGACGAGGATAAAGGGGGCAT
AATAAAAGTCGTTATGACCGGTTCAGCCTCCGATGACCCCCTTTTTCAGCCGCACATCCGCAATAAAAAACGCCGTAAAG
ACCTAGCCAAACGCTTCAAGAACCCTAATGATGAGATGAAATTAGTCATTGTCAGGGATATGTGGTTAACCGGCTTTGAT
GCACCCTGTTTGCATACCCTTTATGTCGATAAACCCATGAAGGGACACGGGTTAATGCAAGCCATAGCGAGGGTAAACCG
TGTATTTAAAGATAAACCAGGGGGGTTAGTTGTTGATTATTTAGGCATTGCCGACCAACTTAAAACAGCCCTCAATGACT
ATACTAAAAGCGATAGGGACGATACAGGAATTCCCGTTAATGAAGCGTTAGCCGTTTGTTTTGAGAAATACGAAATCGTT
AAGGCCATGTATCACGGGTTCAACTATCAACCCTTCTTTACGGGAACTCCCGCACAACGCCTTAATACCATTCCTGCTGC
CCTCGACCATATTTTAGGCATTGAAGACGGCAAAGAACGCTATGTTAAAGGTGTCACCGAATTATCTAAAGCCTTTGCCT
TGGTTAGCAGTACCGATGAAGCGATAGCCATACGGGATGAAGTGGGATTCTTCCAAGCTATCAAAGCGGCAATGGTTAAA
CATACAACAACTCATGGTGGTAAAAGTCCTGAAGAAATTGATGCCGCCGTCCGTCAGATTGTCTCCCTTGCTGTTGCATC
CGATGAAGTTATTGATATATTCGCCGCAGCAGGGTTAAAAAATCCCAACATCGCTATTTTATCTGATGAATTTCTCGAAG
AAATTAAAGGATTACCCTATAAAAATGTTGCCCTTGAAATTCTTAGAAAACTCATCAACGATGATATTAGATCCCGTTTG
CGTAGAAATCTAATACAATCTCGTTCTTTCCGAGAGATGCTGGAAAATACTATCAAACGTTATCAAAACCGTTCTCTTGA
AACTGCCCAAGTCATTAATGAACTTATAGAATTAGCAAAAGATATCAGGGAGGCATACAAACGAGGAGAGAATTTAGGCT
TAACTGAAGATGAAATCGCCTTTTATGATGCACTAGAAGTTAATGATAGTGCTGTTAAAGTATTAGGAGACGATACCCTT
AAAGCCATTGCTAGAGATTTAGTTATAGCCATTCGCAATAATTTAACCATTGATTGGACGGTTAAAGAAACCGTTAGGGC
TAAACTGCGGGTGACAATTAAGCGGCTGTTAAAGAAATATGGTTATCCTCCAGACAAACAAGAGAAAGCGACTCTAACTG
TTCTACAACAAGCCGAGTTACTTAGTGTTGATTGGGCGGCTTAA

Protein sequence :
MKPNFSESVVEDATLAWFELLGYTVCHASELDRQSYSDIILTDSLQTALKKINPQIPSETLQEVIKKITRSDTPNLIENN
LRFHKLLTDGVDVEYQQDGRTKYDKVWLIDFKHPENNQYLAANQLTVTEGKNTRRPDVVIFINGLPIAVIELKNPADENA
TITGAFNQLQTYKQEIPSLFSTNELLIISDGTEARIGTLTADWERFAPWRTVDGENIAPKRVAELETLIRGVFPPKTLLD
ILQSFIVFETDGDTITKKLAGYHQYHAVNKAITATLEATHPQGDKKVGVVWHTQGSGKSLTMAFYAGKIIQQPEMANPTL
VILTDRNDLDDQLFNTFSLCTDLLRQTPTQAESREQLQELLKVASGGVIFTTIQKFSPEYGNQYPLLSNRRNIILIADEA
HRSQYGLEAKVINKQEEAYISYGFAKYLRDALPNASFIGFTGTPIEAGDINTPAVFGDYIDIYDIQRAVEDEATVKIYYE
GRLAKIDLEPSERPNIDPNFEEVTEDEETTTKEKLKSKWARLEALVGAEKRINQIAQDIVTHFENRLASIDGKAMIVCMS
RRICVDLYNAIIKLKPDWHHDEDKGGIIKVVMTGSASDDPLFQPHIRNKKRRKDLAKRFKNPNDEMKLVIVRDMWLTGFD
APCLHTLYVDKPMKGHGLMQAIARVNRVFKDKPGGLVVDYLGIADQLKTALNDYTKSDRDDTGIPVNEALAVCFEKYEIV
KAMYHGFNYQPFFTGTPAQRLNTIPAALDHILGIEDGKERYVKGVTELSKAFALVSSTDEAIAIRDEVGFFQAIKAAMVK
HTTTHGGKSPEEIDAAVRQIVSLAVASDEVIDIFAAAGLKNPNIAILSDEFLEEIKGLPYKNVALEILRKLINDDIRSRL
RRNLIQSRSFREMLENTIKRYQNRSLETAQVINELIELAKDIREAYKRGENLGLTEDEIAFYDALEVNDSAVKVLGDDTL
KAIARDLVIAIRNNLTIDWTVKETVRAKLRVTIKRLLKKYGYPPDKQEKATLTVLQQAELLSVDWAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api52 CAF28526.1 hsdr-like Type I restriction enzyme Not tested YAPI Protein 0.0 51
hsdR YP_251977.1 type I restriction-modification system restriction subunit Not tested SCCmec Protein 0.0 50
hsdR BAD24840.1 type I restriction-modification system endonuclease homologue Not tested Type-V SCCmec Protein 0.0 50
hsdR BAH57699.1 type I restriction-modification system endonuclease homologue Not tested Type-VII SCCmec Protein 0.0 50