Gene Information

Name : Cyan7822_4883 (Cyan7822_4883)
Accession : YP_003890049.1
Strain : Cyanothece sp. PCC 7822
Genome accession: NC_014501
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 5303924 - 5306389 bp
Length : 2466 bp
Strand : +
Note : KEGG: mar:MAE_59550 ATP-dependent Clp protease ATPase subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAGGCCATTAAGGTCATTATGCTTGCCCAAGAGGAAGCCCGCCGTCTAGGACATAACTT
TGTCGGGACGGAACAAATTCTTCTCGGGTTGATCGGCGAAGGAACAGGAGTCGCTGCCAAAGTTCTCAAATCAATGGGGG
TCAATCTTAAAGATGCTCGCATTGAAGTAGAAAAAATTATTGGGCGCGGCTCTGGCTTTGTGGCGGTGGAAATTCCTTTC
ACCCCCAGAGCGAAACGAGTGCTAGAACTCTCCTTAGAGGAAGCTCGTCAATTAGGCCACAACTACATCGGAACTGAACA
CCTACTCTTAGGTTTAATTCGTGAAGGTGAAGGAGTGGCGGCTCGCGTTTTGGAAAATTTGGGTGTGGACCTCTCTAAGG
TCAGAACTCAAGTGATCCGGATGTTGGGCGAAACCGCAGAAGTGGCTGCCGGTGGACCGACCACAGGACGCAATAAAACC
CCCACTCTCGATGAGTTTGGCTCCAATTTAACCCAAATGGCAGCCGAAGGAAAGTTAGACCCGGTGGTGGGACGACAAAA
GGAAATTGAACGGGTGATTCAAATTCTCGGCCGTCGGACTAAAAATAATCCGGTCCTCATTGGGGAACCTGGGGTCGGTA
AAACGGCGATCGCTGAAGGGTTGGCCCAACGCATCGCGACGAAGGATATCCCTGATATCCTCGAAGAAAAGCGCGTGGTG
ACTCTCGATATTGGCTTGCTGGTAGCAGGAACGAAATATCGCGGGGAATTTGAGGAACGTCTCAAGAAGATTATGGACGA
AATTCGTCAAGCTGGGAATGTGATTCTGGTGATTGATGAAGTTCATACTCTGATTGGTGCAGGGGCGGCTGAAGGGGCTA
TTGATGCCGCGAATATCCTTAAACCGGCTCTCGCTAGAGGTGAGTTACAGTGTATCGGCGCGACGACTTTGGATGAGTAC
CGCAAGCACATTGAACGCGATGCGGCTCTAGAACGTCGTTTTCAACCCGTGATGGTGGGTGAGCCGACTGTTGATGAAAC
CATTGAGATTCTCTATGGTTTGAGAGAACGCTATGAGCAACACCATAAGCTCAAGATTCTCGATGAGGCATTGGAAGCGG
CGGCTAAGTTGTCGGATAGATATATCTCTGACCGCTATTTGCCCGATAAGGCCATTGATTTGATCGATGAGGCGGGGTCT
AGAGTGCGCTTGATTACTTCTCAGTTGCCACCGGCGGCTAAGGAGTTGGATAAGGAACTGCGTCAAGTCCTTAAGCAAAA
GGATGATGCGGTGCGTTCTCAAGATTTTGACCGCGCTGGGGAGTTGCGAGACCGCGAAATGGAAATTAAGGCGGAAATTC
GCGCTATTGCTTCGGCGAAGAAGACTGAAGGGGAAAGCGATGAACCTTCGGTTGATGCGGAAGAAATTGCTAATATTGTG
GCTTCTTGGACGGGTATCCCAGTGAATAAGCTGACGGAAACTGAGTCTGAGAAGTTGCTACATATGGAAGATACTTTACA
TCAGCGTCTGATTGGTCAAGAAGATGCGGTGAAGGCGGTATCGAGGGCAATTCGCCGCGCTCGCGTGGGCTTGAAGAATC
CTAATCGTCCGATTGCTAGTTTTGTCTTTTCTGGCCCGACTGGGGTGGGTAAGACGGAGTTAACTAAGGCGTTAGCGGCT
TATTTCTTTGGCTCTGAAGATGCGATGATCCGATTGGATATGTCGGAATTTATGGAACGCCATACGGTTTCTAAGTTGAT
TGGTTCGCCTCCGGGTTATGTGGGTTATAACGAAGGGGGTCAATTGACCGAAGCGGTACGCCGTCGTCCTTATACGGTGG
TGCTGTTTGATGAAATTGAAAAGGCTCACCCGGATGTGTTTAATATTCTGTTGCAGATTTTAGAAGATGGACGGTTGACT
GATGCTAAAGGTCGTACTGTCGATTTTAAGAATACCCTGCTAATTATGACTTCTAATATTGGGTCTAAGGTCATCGAAAA
AGGTGGCGGCGGACTCGGGTTTGAGTTTGAAGCTGACCAAGCGGAAGCGCAGTACAATCGTATTCGCTCGTTGGTGAATG
AAGAACTCAAGCAATACTTCCGTCCTGAATTCCTCAACCGTCTTGATGAGATTATTGTCTTCCGTCAATTGAGTCGGGAT
GAGGTTAAGGAGATTGCTGATATTCTGCTCAAAGAGGTGTTTAGCCGCTTGACAGAAAAGGGCATTACTTTGGAAGTTAC
CCAGAAGTTTAAAGACCGTTTAGTAGAAGAAGGTTATAACCCGGCTTACGGGGCTAGACCTCTGCGGAGAGCGATTATGC
GGCTTTTAGAGGATGTTCTCGCTGAGGAGATTCTCTCGGGACAGGTTAAAGATGGAGATACCGCCATCGCTGATATCGAC
TCCGAAGGTAAGGTTAAGATTATTCACGGTGAAAGACGAGAGTTATTATCTCCTGTGAGTGAATAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGGPTTGRNKT
PTLDEFGSNLTQMAAEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATKDIPDILEEKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGS
RVRLITSQLPPAAKELDKELRQVLKQKDDAVRSQDFDRAGELRDREMEIKAEIRAIASAKKTEGESDEPSVDAEEIANIV
ASWTGIPVNKLTETESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAA
YFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNILLQILEDGRLT
DAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEADQAEAQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSRD
EVKEIADILLKEVFSRLTEKGITLEVTQKFKDRLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSGQVKDGDTAIADID
SEGKVKIIHGERRELLSPVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7822_4883 YP_003890049.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 61
Cyan7822_4883 YP_003890049.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 9e-155 54