Gene Information

Name : Cyan7822_3943 (Cyan7822_3943)
Accession : YP_003889148.1
Strain : Cyanothece sp. PCC 7822
Genome accession: NC_014501
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 4355686 - 4356795 bp
Length : 1110 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: cyh:Cyan8802_1260 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGAACACCTCATCAGAATTTCAAGCTTCTGCTTTTGATCGTGAAATGATGCAACGCTGTATTACCCTAGCGCGTAAGGC
CCTTGGGGCAACGTCTCCTAATCCGATGGTGGGGGCGGTGATTGTCCGTGAGCAAGAAATCGTCGGAGAGGGTTTTCACC
CAGGTGCGGGGCAGCCTCATGCGGAGGTATTTGCCCTATCAGTTGCAGCAGAAAAGGCAAAGGGCGCAACGATCTATATT
AATTTAGAACCTTGTAATCATTATGGACGCACTCCTCCCTGTACAGAAGCCCTGATTAAGGCAGGAATTGCTAAGGTAAT
GGTGGGCATGATCGATCCGGACCCTCGTGTATCTGGAAAGGGTATTGAACGCTTAACTGAAGCAGGTATTGAGGTGGTAG
CCGGCATAGAAGAAGAGGCTTGCCGCCGCTTAAATGAGGGCTTTATCCATCGGGTTTTGTATCAAAGACCTTTTGGAATT
CTCAAATATGCAATGACGCTTGATGGTAAAATTGCGGCGACTTCGGGCCATAGTGCTTGGGTAACTGGGGAAGCTTCCCG
CCGTATCGTCCATCAACTCAGAGCCGCTTGTGATGCGGTAATTATCGGAGGGAATACGGTACGTCAGGATAACCCTCATT
TAACTACTCATGGGGTGTCTTCCCATAATCCTTTGAGGGTGGTGATGAGTCGTAGTTTAAATTTACCCCTTGAGGCTAAT
CTTTGGGAAACCGATAAGGTGCCTACTGTGGTGTTTACCGAGGAGGGAATTAACCCCCCGTTGCAAAAGCAGTTGTTAAA
ACGTAAGGTGGAGGTCATCGAGTTGGAAGTCTTAACCCCAACTCAGGTGATGCAGCATCTTTATCAACGGGGTTTTTGCT
CTGTATTATGGGAATGCGGCGGGACTTTGGCGGCTAGTGCTATTACTGAAGGAATGGTACAAAAGGTTATGGCCTTTATT
GCACCGAAAATTATTGGCGGAGAATCTGCTCCCTCGCCAGTGGGGGATTTAGGATTAGACAAGATGAGTAATGCTTTACA
GTTGCAAAGGGTGGCACTTCAGAGAGTAGATAATGATTTTGTTATTGAGGGTTATTTACCAATGTCTTAA

Protein sequence :
MNTSSEFQASAFDREMMQRCITLARKALGATSPNPMVGAVIVREQEIVGEGFHPGAGQPHAEVFALSVAAEKAKGATIYI
NLEPCNHYGRTPPCTEALIKAGIAKVMVGMIDPDPRVSGKGIERLTEAGIEVVAGIEEEACRRLNEGFIHRVLYQRPFGI
LKYAMTLDGKIAATSGHSAWVTGEASRRIVHQLRAACDAVIIGGNTVRQDNPHLTTHGVSSHNPLRVVMSRSLNLPLEAN
LWETDKVPTVVFTEEGINPPLQKQLLKRKVEVIELEVLTPTQVMQHLYQRGFCSVLWECGGTLAASAITEGMVQKVMAFI
APKIIGGESAPSPVGDLGLDKMSNALQLQRVALQRVDNDFVIEGYLPMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-50 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-50 41