Gene Information

Name : Cyan7822_3320 (Cyan7822_3320)
Accession : YP_003888545.1
Strain : Cyanothece sp. PCC 7822
Genome accession: NC_014501
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 3669628 - 3671349 bp
Length : 1722 bp
Strand : -
Note : KEGG: mar:MAE_28230 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGTCATCTAATCAATCCCAACCTCAACCCCAATCCGGTTCTTCTCTTGAAGAAATTCGCGCTACACGCCTTGAGAAAGT
TGAACAACTCAAACAACTGGGATTGAATCCTTATGAGTATAAATGGGAGTCAACCCACCATGCGGCCCAATTACAAGAAA
AATATGCGTCTTTAGAAAATGGCGAAGAAGTGGACTTAGAAGTGGCTGTTGCTGGACGAATTATCGCCCGCCGCGTGTTT
GGTAAGTTGGCCTTTTTTAATCTCCAAGATGAAAGCGGCACGATACAGTTATATCTCGATAAAAAAAGAATTGGCCAAAC
TATGGCCGATGTACCTAATGCGTTTAATACTGTCATGAAACTGACGGATACCGGCGATATTTTAGGGGCAAAAGGAACCA
TTAAACGGACAGAAAAAGGGGAATTATCCATTTATGTAAATGAGTACGCTATTTTAACGAAATCTTTATTACCCCTGCCG
GATAAATTTCACGGATTAACCGATATTGAAAAACGCTATCGTCAGCGTTATGTGGATTTAATTATTAATCCTGAAGTGCG
AGAAACTTTTCGCCGCCGCGCTCAAATTACCGCTTCTATTCGTCGTTATTTAGAAGGAGAGGGCTTTTTAGAAATTGAAA
CCCCTGTGCTACAAAGCGAAGCCGGCGGGGCTGATGCACGTCCTTTTATTACCTATCACAATACCTTAGAGATGGATTTA
TATCTCCGTATTGCTACCGAATTACATTTAAAACGGTTAATTGTGGGGGGATTTGAAAAAGTCTTTGAGATGGGACGTAT
TTTTAGAAATGAAGGGGTTTCTACGCGCCATAATCCTGAATTTACCTCGATAGAAATTTATCAGGCTTATGCAGATTATC
ACGATATGATGGTTTTGACGGAAAATATTATTACCAATGCGGCTAAAGATGCCCTAGGAACTTTAAAGGTTACCTATCAA
GACCAAGAAATTGATTTAACTCCCCCTTGGCGGCGCTTAACAATGCACCAATTAGTAGAAGAAAAAACGGGGATAGATTT
TAATCAATTTCAAACCTTTGAGGAAGGGAAAAAAGCCGCGCAAAAAGCCGGAATACAAGTTTCAGAAGATTGTAAGACCC
TTGGAAAGTTACTCTATGAATCTTTTGAGCAAAAGGTAGAAGAAAGCTTAATTGAGCCGACTTTTGTCCTAGATTTTCCC
GTTGAAATTTCGCCTTTAGCTAAACCTCATCGCAATAAACCGGGGTTAGTAGAAAGGTTTGAATTATATATTGTTGGACG
AGAATTAGCCAATAGTTTTTCTGAGTTAACAGATCCCATTGATCAACGAGAAAGATTAGAAGCACAAGCGGAGAAAAAAG
CCGCCGGAGATTTAGAGGCCCATAGTGTAGATGAAGATTTCTTAACCGCTTTAGAGTATGGAATGCCGCCCACTGGGGGG
TTAGGAATTGGGATTGATCGCTTAGTGATGTTATTAACCGATTCTGCGAGTATTCGAGATGTGATTGCTTTCCCTCTACT
GAAGAGTCAAAGTGCGGCTTTAAAAGGGTTTGATTATGATGCTGATAAAAAGGTTTTGAGGGTTGAATTTTTGAATGGTA
GTGTTTATTTATATCATGATATTCCTGAGTCGAAATATAAGGAGTTAGAAAAAGCTCCCTCAAAAGGTCAGTTTTTTAAT
GCTGAAATTCGAGATAAATTTGGGTTTGATCGGGAGATATAA

Protein sequence :
MSSNQSQPQPQSGSSLEEIRATRLEKVEQLKQLGLNPYEYKWESTHHAAQLQEKYASLENGEEVDLEVAVAGRIIARRVF
GKLAFFNLQDESGTIQLYLDKKRIGQTMADVPNAFNTVMKLTDTGDILGAKGTIKRTEKGELSIYVNEYAILTKSLLPLP
DKFHGLTDIEKRYRQRYVDLIINPEVRETFRRRAQITASIRRYLEGEGFLEIETPVLQSEAGGADARPFITYHNTLEMDL
YLRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNPEFTSIEIYQAYADYHDMMVLTENIITNAAKDALGTLKVTYQ
DQEIDLTPPWRRLTMHQLVEEKTGIDFNQFQTFEEGKKAAQKAGIQVSEDCKTLGKLLYESFEQKVEESLIEPTFVLDFP
VEISPLAKPHRNKPGLVERFELYIVGRELANSFSELTDPIDQRERLEAQAEKKAAGDLEAHSVDEDFLTALEYGMPPTGG
LGIGIDRLVMLLTDSASIRDVIAFPLLKSQSAALKGFDYDADKKVLRVEFLNGSVYLYHDIPESKYKELEKAPSKGQFFN
AEIRDKFGFDREI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-106 48
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 6e-86 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan7822_3320 YP_003888545.1 lysyl-tRNA synthetase VFG1668 Protein 1e-106 48