Gene Information

Name : Cyan7822_0229 (Cyan7822_0229)
Accession : YP_003885553.1
Strain : Cyanothece sp. PCC 7822
Genome accession: NC_014501
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 251567 - 253723 bp
Length : 2157 bp
Strand : +
Note : KEGG: cyh:Cyan8802_3247 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Helix-hairpin-helix DNA-binding class 1

DNA sequence :
ATGGTCAATATTGCTCAAATTCTTGCTACTGAGTTATCTTTACGTCCTCAACAGGTCTCAAATGCTCTTGAATTATTAGC
AGAAGGAGCAACTATTCCTTTTATTGCGCGTTATCGCAAGGAAAAAACCGGCTCACTCGATGAAACTCAATTAAGAACTA
TCTCGGAACGTTATACTTATATAACTGAATTAGAAGACCGGAAAAAAGTTATCTTAGAAGCAATTGCGGCACAAAATAAA
CTGACTGATGAACTGAAAAATAAAATTGAATCCTGTTTACAAAAAAACGAATTAGAAGACCTCTATTTACCTTATAAACC
TAAACGCCGCACCCGAGCAACTATTGCTAAAGAACAAGGGTTAGAACCTTTAGCCGAGTTGATTAAATCCCTTAATTATC
CTGCCTCTAAACCTGTTTCTTTAAGGGAAGAAGCGGCTAAATATATTAATGAGGAAAAAGGAATTAAAACAGAAGAAGAG
GCTTTAAATGGGGCATCCGATATCTTAGCAGAAGAAGTATCCGAAAAAGCGAATCTACGGGCTTACTTACGGGATTATTT
GATGAAAGAGGGGCTGTTTATTTCTCGTATTAAAGATGAACACCCAGAAGGCAGTACAAAATATGAAATGTATCGAAACT
TTCAAGCCGCCGTTAAAAAAATTGCACCTCATAATATTTTAGCCTTATTTCGCGGAGAAAGCGAAGGAATTTTAGCCGTT
GATCTGGATTTTGATGAGGCTTTTGTTCAATCCTATTTAGAGTCACAGGAAATCAAAACAAAAATTTCCGAAGTGCGAGA
GTTTTATCAAAAAATGCTCAAGGATGCTTTTAACCGTTTGATTAAATCTTCTTTAATTCGAGAAGTGAGATCCGATAGAA
AAACTTGGGCAGATTTAGAGTCTATTAAAACTTTTGAAGCAAATTTAAGAAACTTGTTACTCTCTCCACCGGCAGGAATG
AAGCCAACAATGGCAATAGATCCAGGGTTTCGTACGGGATGTAAGGTGGCAATTTTATCAGAAACCGGCAAATTTTTAGA
CTATCAAGCAATCTTTCCTCATACGGGAGATCGAGGACGTTCTGAAGCGGCTATTACAGTTAAAAAATTAATTGAAAAAT
ATCAGATAGAATTGATCGCTATCGGCAATGGTACAGCCTCCCGAGAAACGGATCAATTTATTACTGAAGTATTGAAAAGT
TTAGACAAAAAACCGGTTAAAGTAATTGTCAATGAGTCAGGCGCTTCTATTTATTCTGCATCGGATACAGCAAGGGAAGA
GTTTCCTGATTTAGATGTTACAGTACGGGGAGCCATTAGTATAGGAAGAAGATTACAAGACCCTCTGGCAGAGTTGGTAA
AAATTGACCCTAAATCCATAGGCGTGGGGCAATATCAGCATGATGTAGAGCAAAAGTTGTTGAAAAAGAAATTAGAGGAA
ACCGTCGAAAGTTGTGTCAATTATGTGGGGGTTGATTTAAATACGGCTTCTAAACAATTGTTGATTTTTGTGTCGGGGAT
AACGCCTTCTGTGGCGAATAATATTGTCGAATATCGCAACAAAAATGGGGCGTTTAAGAACCGCAAAGAGTTGCTGAAAG
TGGCTAAACTCGGGCCGAAAGCCTTTGAACAAGCGGCGGGTTTTTTACGTATTCGGGGAGGGGATAATCCTTTAGATAAT
ACTGCTGTTCACCCAGAAAGTTATAAGGTGGTGGAAGCGATAGCGGCTTCTTTGGGAGTGCCTTTAAAGAAAATTACTGA
GGTGAGTTCCCGCATACAGTCTTTAGATTTGAAGCAATTTGTCACTGATACGATTGGTATACCGACTTTAAAGGATGTGA
TTCAAGAGTTAGAAAAACCGGGAAGGGACCCTAGAGAACAGTTTCAATATGCTTCTTTTAAAGAGGGTATTATGGAGATT
TCGGATTTAAAAGAGGGGATGGAGTTAGAAGGAATTGTTACGAATGTGGTGAATTTTGGGGCGTTTGTGGATGTGGGAGT
ACATCAGGATGGGTTGGTTCATATTTCCCAATTGGCGGATCATTTTGTCAGTGACCCTAATCAGGTGGTAAAAGTGGGAC
AGGTGGTAAAGGTGCGGGTTATGGAGGTGAATGAAAAGTTAAAACGGATTGGTTTGTCGATGAAGGCGGCTAGGTAA

Protein sequence :
MVNIAQILATELSLRPQQVSNALELLAEGATIPFIARYRKEKTGSLDETQLRTISERYTYITELEDRKKVILEAIAAQNK
LTDELKNKIESCLQKNELEDLYLPYKPKRRTRATIAKEQGLEPLAELIKSLNYPASKPVSLREEAAKYINEEKGIKTEEE
ALNGASDILAEEVSEKANLRAYLRDYLMKEGLFISRIKDEHPEGSTKYEMYRNFQAAVKKIAPHNILALFRGESEGILAV
DLDFDEAFVQSYLESQEIKTKISEVREFYQKMLKDAFNRLIKSSLIREVRSDRKTWADLESIKTFEANLRNLLLSPPAGM
KPTMAIDPGFRTGCKVAILSETGKFLDYQAIFPHTGDRGRSEAAITVKKLIEKYQIELIAIGNGTASRETDQFITEVLKS
LDKKPVKVIVNESGASIYSASDTAREEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVEQKLLKKKLEE
TVESCVNYVGVDLNTASKQLLIFVSGITPSVANNIVEYRNKNGAFKNRKELLKVAKLGPKAFEQAAGFLRIRGGDNPLDN
TAVHPESYKVVEAIAASLGVPLKKITEVSSRIQSLDLKQFVTDTIGIPTLKDVIQELEKPGRDPREQFQYASFKEGIMEI
SDLKEGMELEGIVTNVVNFGAFVDVGVHQDGLVHISQLADHFVSDPNQVVKVGQVVKVRVMEVNEKLKRIGLSMKAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-154 49