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Name : Dda3937_01705 (Dda3937_01705) Accession : YP_003881566.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Unknown Product : phage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 858294 - 859532 bp Length : 1239 bp Strand : - Note : very similar to the integrase of E. coli cryptic prophage CP4-57, and yet it is integrated into a different site DNA sequence : ATGGCTAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTGTATGA CGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGAAGTAAGCTCTGGCAATTCCGTTACTATCGGCCTCTGACCAAGC AGCGAACCAAACAGAGCTTCGGTGCCTACCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTT TTATTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTGAGAAATTCCCAAGATGCCAAAACCAACACTTT CCTGTTAGTTGCTGAGCGTTGGTGGAATGTGAAGAAAGCCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGTTCGC TTGAGAGAGATGTTTTCCCAGCAATCGGTGATATCAGTGTCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAG CCTGTTCAGGCCAGAGGGGCATTAGAGACTGTTCGCCGCCTTTTTCAGCGTATTAACGAAGTTATGATTTATGCGCAGAA CACGGGCCTAATTGATGCGGTTCCCAGCGTAAACATCGGGAAAGCATTCGAGAAACCGCAGAAGAAAAATATGCCGAGTA TCCGCCCGGATCAACTTCCACAGTTAATGCAAACAATGCGTACGGCAAGTATCAGTGTGTCAACGCGGTGCTTGTTCATG TGGCAGCTTCTCACCATTACCCGCCCTGCCGAAGCTGCTGAGGCTCGATGGGATGAGATCGATTTCAATGCTAGCGAATG GAAAATTCCAGCAGCCCGAATGAAGATGAACCGGGACCATACGGTTCCACTATCCAATGAGGCTCTCTCTATTCTGGAAA TGATGAAGTCACTCAATGGTGGCCGAGAATTTATCTTTCCCAGTCGCATCAAACCTACCAAGCCAATGAACAGCCAAACA GTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGCGTACTCGTATCACACGGTTTACGTTCTATCGCTAGTACGGCACT CAATGAGGAAGGATTTCCGCCTGATGTCATTGAAGCAGCACTGGCTCATGTAGACAAAAATGAGGTACGTCGCGCTTACA ACCGCAGTGATTACCTTGAGCAACGTCGCCCTATGATGCAATGGTGGGCTGATTTTGTAAAATCAGCGGAAAAGAAGATT AATGATAATTCAGTGATTAAACTGAAATTTGCCTCGTAG Protein sequence : MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKV LLAKDIDPQEHQKEQVRNSQDAKTNTFLLVAERWWNVKKASVTEDYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQ PVQARGALETVRRLFQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISVSTRCLFM WQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLNGGREFIFPSRIKPTKPMNSQT VNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVKSAEKKI NDNSVIKLKFAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 3e-107 | 54 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 3e-107 | 54 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 2e-107 | 54 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 2e-107 | 54 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 2e-107 | 54 |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-105 | 50 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 3e-83 | 46 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-82 | 46 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-82 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dda3937_01705 | YP_003881566.1 | phage integrase | VFG1092 | Protein | 5e-83 | 46 |
