Gene Information

Name : Dda3937_02284 (Dda3937_02284)
Accession : YP_003881459.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : ISEch12 OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 734270 - 735022 bp
Length : 753 bp
Strand : +
Note : IS3/IS407 family

DNA sequence :
ATGCAGAGCAGAACGGTTTACCACTGGCTGAGTCGGCGTGACGATCGGGCAATAACCCTGCGCATCAGGGAGATAGCAGA
AACCCGGATACGCTACGGTTGTCCACGCATTCATATCCAGTTACGCCGGGAAGGCTGGCCTGTTAACCACAAGAAAACCC
ACCGGATTTATTGTCTGGAAGGACTGAACCTGCGCAGAAAGCGGCCCCGCAGGCATGTCAGTGCAGCACGCCGTCAGCAG
CGCCCGACGCTGACGCATGTCGATCAGTGCTGGAGTATGGATTTTGTGTCGGATAATCTGTTTAACGGGCGGCGTTTCCG
GGCACTGACTGTAGTGGATAATTTTAGTCGGGAATGTCTGGCGATCCATGCCGGAAAATCACTGAAAGGTGACGATGTGG
TCAGCGTAATGGAAGCGCTGCGGGTGCTGGATAAGCGCCTGCCGGTACGTATTCAGACGGATAACGGCAGCGAGTTTATC
TCGAAAAGTCTGGATAAGTGGGCGTATGAACACGGTGTCACGATGGACTTCTCCCGCCCCGGAAAACCGACAGATAATCC
GTTTATTGAATCATTTAACGGTAGCCTGCGCGACGAATGCCTGAACATTCACTGGTTTTTATCACTGGAAGATGCGCAGG
AGAAACTCGACAACTGGCGCAGGGAATATAATCATGAGAGAACGCATTCATCATTAAATGACATGACTCCGGCTGAATTT
ATCCGAAGTCTCCAGAAAGGCGAAGATCTCTGA

Protein sequence :
MQSRTVYHWLSRRDDRAITLRIREIAETRIRYGCPRIHIQLRREGWPVNHKKTHRIYCLEGLNLRRKRPRRHVSAARRQQ
RPTLTHVDQCWSMDFVSDNLFNGRRFRALTVVDNFSRECLAIHAGKSLKGDDVVSVMEALRVLDKRLPVRIQTDNGSEFI
SKSLDKWAYEHGVTMDFSRPGKPTDNPFIESFNGSLRDECLNIHWFLSLEDAQEKLDNWRREYNHERTHSSLNDMTPAEF
IRSLQKGEDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-54 58
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-40 46
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-46 44
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 9e-42 43