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Name : lysS (Dda3937_02292) Accession : YP_003881450.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 725336 - 726853 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGTCTGAACCACAAAATCAGGGTGCCGAACAGGCGCTGGATCTTAATAACGAACTCAGAACGCGCCGCGAGAAACTGGC GTCGTTGCGTGAAACCGGCGTGGCTTTCCCGAATGATTTCCGCCGTGACAGCATTTCTGATCGACTGCACGCCAGCTACG ACGAAAAAGACAACGAAGAGCTGGAAGCGCTGGGTCTGGAAGTGAACGTGGCCGGCCGCATGATGACCCGTCGTATCATG GGCAAGGCGTCGTTCGTGACGCTGCAGGACGTGGGCGGCCGCATTCAGCTGTATGTGTCGCGCGACGATCTGCCGGAAGG CGTCTACAACGAGCAGTTCAAAAAATGGGACCTCGGCGACATCGTCGGCGCGCGCGGCAAGTTGTTCAAAACCAAAACCG GCGAGTTGTCGATCCACTGTACCGAACTGCGTCTGCTGACCAAGGCGCTGCGCCCGTTGCCGGACAAGTTCCACGGCCTG GCGGATCAGGAAACCCGCTATCGTCAGCGCTATCTGGACCTGATCGCTAACGAAGAGTCCCGTCATACTTTCCGCGTGCG TTCGCAGATTATGGCTGGCATCCGCCAGTTCATGGTCGGCCGCGACTTCATGGAAGTGGAAACGCCGATGATGCAGGTGA TCCCCGGCGGCGCGGCGGCGCGTCCGTTCATCACCCATCACAACGCGCTGGATATCGACATGTACCTGCGTATCGCGCCG GAACTGTACCTGAAGCGTCTGGTGGTGGGCGGTTTTGAACGCGTGTTCGAAATCAACCGCAACTTCCGTAACGAAGGCGT GTCGCCGCGTCACAATCCTGAGTTCACCATGATGGAACTCTACATGGCGTACGCGGACTACAAAGACCTGATCGAACTGA CCGAGTCGCTGTTCCGCACGCTGGCGCAGGACGTGCTGGGCGCGACCGAAGTGCAGTACGGCGACCAGGTGTTCGACTTC GGCAAGCCGTTCGAGAAGCTGACCATGCGTGAGGCGATCAAGAAATATCGCCCGGAAACCAACATGGCGGATCTGGACAG CTTTGACGCGGCGAAAGCCATCGCGGAATCTATCGGCATCAAGGTGGAGAAGAGCTGGGGTCTGGGCCGTATCGTCACCG AGATCTTCGAAGAAACCGCCGAAGCACATCTGATTCAGCCGACCTTCATCACCGAGTACCCGGCGGAAGTCTCTCCGCTG GCGCGTCGTAACGACCAGAACCCGGAAATCACCGACCGCTTTGAATTCTTCATCGGCGGGCGTGAAATCGGCAACGGTTT CTCCGAGCTGAACGACGCTGAAGATCAGGCGCAACGCTTCCAGGATCAGGTTGCTGCGAAAGACGCCGGCGATGACGAAG CCATGTTCTACGACGAAGACTACGTTACCGCGCTGGAACACGGCCTGCCGCCGACCGCCGGCCTGGGCATCGGTATCGAT CGTCTGGTGATGCTGTTTACCAACAGCCACACCATCCGCGACGTGATCCTGTTCCCGGCGATGCGTCCGCAGAAGTAA Protein sequence : MSEPQNQGAEQALDLNNELRTRREKLASLRETGVAFPNDFRRDSISDRLHASYDEKDNEELEALGLEVNVAGRMMTRRIM GKASFVTLQDVGGRIQLYVSRDDLPEGVYNEQFKKWDLGDIVGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANEESRHTFRVRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGAAARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGATEVQYGDQVFDF GKPFEKLTMREAIKKYRPETNMADLDSFDAAKAIAESIGIKVEKSWGLGRIVTEIFEETAEAHLIQPTFITEYPAEVSPL ARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RLVMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-170 | 69 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-93 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003881450.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-170 | 69 |
