Gene Information

Name : xerD (Dda3937_02296)
Accession : YP_003881446.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 720584 - 721483 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
ATGCCAAAACAGGATCAGACGTTAATCGAGCAGTTTCTGGATGCTCTGTGGCTGGAGCGCAATCTGGCGGAAAATACGCT
GTCGTCCTATCGCAATGACCTGCGCTCGCTGGCGGACTGGCTGGCTCATCATGACAGTAGCCTGTTGCAGGCGCAGCCGT
CGGATTTACAGGACTTTCTGGCTGAACGCCTGGAAGGCGGCTACAAGGCGACCAGTTCAGCCCGTCTGTTGAGCGCGATG
CGGCGCTTGTTCCAGTACCTGTACCGGGAAAAGCAGCGCCCCGACGACCCGAGCGCGCCGCTGTCTTCGCCCAAACTGCC
GCAGCGGCTGCCGAAAGATCTGACGGAGGCGCAGGTGGAAGCGCTGCTGGCGGCGCCGGTTACCGATCAGCCGATCGAAC
TGCGGGACAAAGCGATGCTGGAGCTGCTGTACGCCACCGGCCTGCGCGTATCGGAACTGGTGGGGCTGACCATCAGCGAC
GTCAGCCTGCGGCAGGGCGTGGTGCGCGTGATAGGGAAGGGCAACAAAGAACGGCTGGTGCCGCTGGGAGAAGAGGCGGT
GTACTGGCTGGAGCAGTATCTGGAGTACAGCCGTCCCTGGCTACTGAACGGCCAGACGCTGGATGTGCTGTTCCCAAGCA
ACCGCGCCCAGCAAATGACGCGCCAGACGTTCTGGCACCGCATCAAGCACTATGCGACACTGGCGTCTATTGACAGCAAT
AAACTTTCTCCGCATGTTTTGCGTCATGCCTTTGCAACCCACCTGCTGAATCACGGTGCGGATCTGCGAGTGGTACAGAT
GTTGCTGGGCCACAGCGATCTTTCCACCACGCAGATTTATACCCACGTTGCGACGGAGCGGCTGAGACAGCTGCATCAAC
AGCACCATCCCCGGGCATGA

Protein sequence :
MPKQDQTLIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHDSSLLQAQPSDLQDFLAERLEGGYKATSSARLLSAM
RRLFQYLYREKQRPDDPSAPLSSPKLPQRLPKDLTEAQVEALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISD
VSLRQGVVRVIGKGNKERLVPLGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSN
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-58 51
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-58 51