Gene Information

Name : xylA (Dda3937_00985)
Accession : YP_003885185.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : D-xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 4758707 - 4760026 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence :
ATGCACGCTTATTTTGATCAGATAGAAAAAGTTCGCTTTGAAGGTCAGGGCAGCCGCAATCCGTTTGCCTTCCGCCATTA
CAACCCTGACGAGGTAATCCTCGGCAAGCGCATGGCCGACCATTTGCGTTTTGCGGTCTGTTACTGGCACACCTTCTGCT
GGAACGGCACCGATATGTTCGGCGCCGGCGCTTTCGCCCGGCCCTGGCAGCAGCCCGGCGACGCACTGGCGCTGGCGAAA
CGCAAGGCCGATATCGCCTTCGAATTCCTGCACAAACTGGGCGCGCCCTATTACTGTTTCCACGATGTCGACGTCGCGCC
GGAAGGGGGATCGCTGCAGGAATACTTGAACAACTTCGCCGCCATGACCGACATTCTGGCGGCCAAACAGCAGGAAACCG
GCGTGAAGCTGCTGTGGGGCACCGCCAACTGCTTTACCAACCCGCGTTATGCCGCCGGCGCCGCCACCAATCCCGACCCG
GAAGTGTTCGCCTGGGCCGCCACGCAGGTGTTCACCGCCATGAACGCCACCAAAACGCTGGGCGGTGAGAATTATGTGCT
GTGGGGTGGCCGCGAAGGCTATGAAACTCTGCTCAATACCGATCTGCGCCAGGAGCGCGAACAGATCGGGCGCTTCATGC
AGATGGTGGTGGAGCACAAGCATAAGATCGGTTTCAACGGCACGCTGCTGATCGAACCCAAACCGCAGGAACCGACCAAA
CACCAGTACGACTACGATGTCGCCACCGTCTACGGCTTCCTCAAACAGTTCGGGCTGGAGAAGGAAATAAAGGTCAATAT
CGAAGCCAACCACGCCACGCTGGCGGGGCATACGTTCCACCATGAGATCGCCACCGCGATCGCGCTCGGCATCTTTGGTT
CGGTGGACGCCAACCGCGGCGACCCGCAGCTTGGCTGGGATACCGACCAGTTCCCCAACAGCGTGGAGGAAAACGCGCTG
GTGCTCTATGAAATCCTGAAAGCGGGCGGGTTCACCACCGGCGGCCTCAATTTCGACGCCAAGGTCCGCCGCCAGAGCAC
CGATCGCTACGACCTGTTCCACGCCCATATCGGCGCGATGGATACGCTGGCGCTGGCGCTCAAGGTGGCGGTTCGCATGC
TGGAGGACGGCGAACTGAATCAGCACGTCGCCAATCGCTACGCCGGCTGGAACAGTGAACTGGGGCAGCAGATCCTGCAA
GGCAACGCGTCGCTGGAGATGCTGGCGGGTTACGCCGCCCGTCACCAGCTTGACCCACAGCACCACAGCGGGCAGCAGGA
ACGGCTGGAAAATCTGGTTAATCGCTACCTGTTCGGTTGA

Protein sequence :
MHAYFDQIEKVRFEGQGSRNPFAFRHYNPDEVILGKRMADHLRFAVCYWHTFCWNGTDMFGAGAFARPWQQPGDALALAK
RKADIAFEFLHKLGAPYYCFHDVDVAPEGGSLQEYLNNFAAMTDILAAKQQETGVKLLWGTANCFTNPRYAAGAATNPDP
EVFAWAATQVFTAMNATKTLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKIGFNGTLLIEPKPQEPTK
HQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHTFHHEIATAIALGIFGSVDANRGDPQLGWDTDQFPNSVEENAL
VLYEILKAGGFTTGGLNFDAKVRRQSTDRYDLFHAHIGAMDTLALALKVAVRMLEDGELNQHVANRYAGWNSELGQQILQ
GNASLEMLAGYAARHQLDPQHHSGQQERLENLVNRYLFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 8e-108 50
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-107 50