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Name : Dda3937_00343 (Dda3937_00343) Accession : YP_003884940.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 4479417 - 4480628 bp Length : 1212 bp Strand : + Note : - DNA sequence : ATGTTTCTTGAAGAACGCCGAAACAAGATTCTGGAATATCTGGATCAATACGATCGTGCCAGCGTGGAATATCTGGCCGC TATTTTCTCTGTCACCAGAGAAACCATACGCAGTGACCTGAATGCCCTGGCCCGGCAACGATTGGTTCAGCGTTGCCATG GCGGCGCCGTTATTATTCGCCGCAGCCTGCAATCTCAGTTGATTACCGAAACCGGGAAAGATTTTGAGGTTCTGTTAAAG AAAATAAAAAATCAGGTAAGAAATAAGAGCGTACGAAAAAAGGATAAAACCATGAAGGGTAAAGTCTGTATTCTTGGCTC GTTTAATGTGGATATTGTCGCCAGGGTCGCGCGTTTTCCCAAAGGTGGGGAATCGTTGCTGGCGCAAGGCAGCGCGCTGG GTCCGGGAGGGAAAGGCGCGAATCAGGCCATGGCCGCCAGCATGGCCGGCGCGAAAGTACATTTCGTTTCTAAAGTCGGG AAAGATCAATTCAGCCATTTCGCTTACGAGCATTTATCAAAATCCGCCATTCACTCATTTAAATTATATCAGTCCGACAC GGAACCAACCGGCAACGCCATTATTTATGTCTCGCTACAGAATGGCGAAAATATGATTGCCATTTATTCCGGTGCCAATA AGACACTGACCGACGAAGAAATTGCCGAAATTATGCCCGAGCTGGAAGACGCGGACGTATTGCTGCTGCAAATGGAAAAT AATTTCCCGGCCACGCTGAGCGCCATGAAACTGGCCAGGGCGCTCGACACGCAAATTATCCTCAACCCGGCCCCGTATTC CGACGATGTTTTATCCTGCCTCGATTATGTGGATATCATCACCCCGAATGAAACCGAAGCGTCATTGCTGTCCGGCATTG AGATCAACAATCTGGACAGCGCCAGACAAGCCGCGCAGAAAATCCACGCGCTTGGCGCCGCGCGGGTCATCATCACCATG GGCGCCAACGGCGCCCTGCTGTTCGACGGCCAGCAATTCCAGCACATCCCGGCCTTTCCCGCCGTCAGCGTGGATACCAC CGGCGCCGGCGATGCCTTCAACGGCGCGTTCGCCGCCGCCGTAGCCGGCGGACAAAGCGTGGCGCAAGCCGCCACCTATG CCAATGCGTTCGCCTCTCTGGCGGTCGAACGGGAAGGCGCCGCCAATATGCCAACCCAGCAGCAGGTAACGAACCGGCTG GCGCAGCGCTGA Protein sequence : MFLEERRNKILEYLDQYDRASVEYLAAIFSVTRETIRSDLNALARQRLVQRCHGGAVIIRRSLQSQLITETGKDFEVLLK KIKNQVRNKSVRKKDKTMKGKVCILGSFNVDIVARVARFPKGGESLLAQGSALGPGGKGANQAMAASMAGAKVHFVSKVG KDQFSHFAYEHLSKSAIHSFKLYQSDTEPTGNAIIYVSLQNGENMIAIYSGANKTLTDEEIAEIMPELEDADVLLLQMEN NFPATLSAMKLARALDTQIILNPAPYSDDVLSCLDYVDIITPNETEASLLSGIEINNLDSARQAAQKIHALGAARVIITM GANGALLFDGQQFQHIPAFPAVSVDTTGAGDAFNGAFAAAVAGGQSVAQAATYANAFASLAVEREGAANMPTQQQVTNRL AQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 4e-64 | 48 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 2e-63 | 48 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 1e-63 | 48 |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 7e-63 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dda3937_00343 | YP_003884940.1 | ribokinase | VFG0483 | Protein | 7e-64 | 48 |
