Gene Information

Name : ssb (Dda3937_03468)
Accession : YP_003884514.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4012742 - 4013287 bp
Length : 546 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTTATCGGGAATCTGGGTCAGGACCCGGAAGTCCGTTACATGCCGAACGG
CGGCGCAGTCGCTAACCTGACTCTGGCCACGTCGGACAGCTGGCGCGACAAGCAGACCGGCGAGCAGAAAGAACGCACCG
AGTGGCACCGCGTGGCGCTGTACGGCAAGCTGGCGGAAATCGCCGGTGAATACCTGCGCAAAGGCTCTCAGGTATATATC
GAAGGCCAGCTGCGCACCCGCAAATGGCAGGATCAGGGCGGCCAGGATCGCTACACCACCGAAGTGGTAGTCGATATCTC
CGGCAGCATGCAGATGCTGGGCGGTCGCACAGGCGGCGGCGCTCCGGCCGGCGGCGGCATGGGCAACAACGCGGGCGGCA
ATCCGCAGCAAGGCGGTTGGGGTCAGCCGCAACAGCCGCAGCAAGCTAACCAGTTCAGCGGCGGCGGTCAGTCCCGTCCG
CAGCAAAGCGCGCCGATGCCGAGCAACGAGCCGCCGATGGATTTTGATGACGACATTCCGTTCTGA

Protein sequence : 
MASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVALYGKLAEIAGEYLRKGSQVYI
EGQLRTRKWQDQGGQDRYTTEVVVDISGSMQMLGGRTGGGAPAGGGMGNNAGGNPQQGGWGQPQQPQQANQFSGGGQSRP
QQSAPMPSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 8e-39 68
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-44 65
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-44 65
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-44 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_003884514.1 ssDNA-binding protein VFG0576 Protein 2e-48 76