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Name : dnaB (Dda3937_03445) Accession : YP_003884488.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3981027 - 3982430 bp Length : 1404 bp Strand : + Note : - DNA sequence : ATGGCAGAAAAAAAACCAACTAAACCGGCAGAATCCCGCGACCGTCAGGTAGAAGGGCTAAAACTTCCGCCCCACTCCAT CGAAGCGGAACAGTCGGTGCTAGGGGGGTTGATGCTCGACAACGAGCGTTGGGACAACGTCGCCGAGCGCGTCTGTGCCA ACGACTTTTTCAACCGCGCCCACCGACTGATCTTTAACGAGATGCAGCGCCTGCTGGAAATGAGCAAACCCATTGACCTG ATCACCCTGTCGGAGTCACTGGAGCAAAAAGGCGAGCTGGAGTCCGCCGGAGGGTTCGCCTACCTGGCGGAACTGGCGAA AAACACCCCCAGCGCCGCCAATATCGGCGCGTATGCCGACATCGTGCGTGAACGCGCGGTAGTGCGTGAAATGATCGCCG TCGCCAACGAAATCGCCGACGCCGGTTACGACCCGCAGGGCCGCAGCAGCGAAGACCTGCTGGATCTGGCCGAATCGCGC GTGTTTCAGATAGCGGAAAACCGCGCCAGCAAGGATGAAGGCCCCAAAAGCATCGACCGCATTCTGGAAGACACCGTCTC GCGCATCGAACAGCTTTATCAGCGCCCGCACGACGGTGTGACCGGAGTATCCAGCGGCTATCAGGATCTGGACAAGAAAA CCGCCGGTTTGCAGAAATCGGATCTGATTATCGTCGCGGCGCGTCCCTCCATGGGGAAAACCACCTTCGCCATGAACCTG TGCGAAAACGCCGCCATGACGCAGGAAAAACCGGTGCTGATTTTCAGTCTGGAAATGCCCGGCGAGCAGATCATGATGCG TATGCTGGCGTCGCTGTCGCGCGTGGACCAGACCCGCATCCGTACCGGTCAGCTCGACGACGAGGACTGGGCGCGCATCT CCAGCACCATGGGGCTGCTGCTGGAAAAGCGCAACATGTACATCGACGACTCCTCCGGCCTGACGCCGACCGAAGTGCGC TCCCGCGCCCGTCGGGTATTCCGCGAGCACGACGGCCTGAGCCTGATCATGATCGACTACCTGCAGTTGATGCGGGTGCC GTCGCTGTCCGATAACCGAACGTTGGAAATCGCCGAAATTTCCCGCTCGCTCAAAGCGTTGGCAAAAGAATTGCAAGTGC CGGTCATCGCGCTGTCGCAGCTCAACCGCAGTCTGGAACAGCGTGCCGATAAACGTCCGGTTAACTCCGACCTGCGTGAA TCCGGCTCCATCGAGCAGGACGCCGACCTGATCATGTTTATCTACCGTGACGAGGTGTATCACGAAAACAGCGATCTGAA AGGCATCGCTGAAATCATTCTAGGGAAGCAGCGTAACGGGCCGATCGGCACCGTGCGCCTGACCTTTAACGGGCAGTGGT CGCGTTTCGACAATTACGCCGGGCCACAATATGATGATGAATAG Protein sequence : MAEKKPTKPAESRDRQVEGLKLPPHSIEAEQSVLGGLMLDNERWDNVAERVCANDFFNRAHRLIFNEMQRLLEMSKPIDL ITLSESLEQKGELESAGGFAYLAELAKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRSSEDLLDLAESR VFQIAENRASKDEGPKSIDRILEDTVSRIEQLYQRPHDGVTGVSSGYQDLDKKTAGLQKSDLIIVAARPSMGKTTFAMNL CENAAMTQEKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGLLLEKRNMYIDDSSGLTPTEVR SRARRVFREHDGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVIALSQLNRSLEQRADKRPVNSDLRE SGSIEQDADLIMFIYRDEVYHENSDLKGIAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-98 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-105 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-104 | 53 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 7e-104 | 53 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-89 | 50 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-89 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-85 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-80 | 46 |
