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Name : clpB (Dda3937_01574) Accession : YP_003884201.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3677360 - 3679933 bp Length : 2574 bp Strand : - Note : - DNA sequence : ATGCGTCTGGATCGTCTTACCAACAAGTTCCAGCTTGCCCTCGCTGATGCCCAATCTCTCGCCCTCGGACGAGATCATCA ATTTATTGAGCCGCTGCATTTGATGAGTGCCCTTCTGAATCAAGAAGGGGGCACCGTCGGCCCGTTGTTGACAGCAGCTG GGGCAAATGTGAGCCGTCTTAAAAGTGAAATTGAACAGGCAATCAGCCGATTACCACAGGTGGAAGGCACCGGTGGCGAT GTTCAACCGTCCAGTGAGCTGGTACGGACGCTCAATATCTGCGACAAGCTGGCGCAGAAAAAGGGCGACACATTTATTTC TTCAGAATTATTCGTGCTGGCGGTATTTGAATCGCGCAGCGCATTGGGCGATCTGTTAAAAAATGCAGGCGCCACTCAGC AGAATGTGACTCAGGCTATCGAGCAGGTTCGCGGTGGGCAGCAGGTCAACGAGCAGAGCGCCGAGGACCAGCGTCAGGCC CTGAAAAAATTCACGATTGATCTCACCGAGCGTGCCGAACAAGGCAAGCTGGACCCGGTGATTGGCCGTGATGAGGAAAT TCGACGCACCATTCAGGTGCTGCAGCGCAGAACCAAAAACAACCCGGTTTTGATCGGTGAACCTGGCGTCGGGAAAACTG CGATTGTCGAAGGGCTGGCGCAGCGTATCGTTAATGGAGAAGTTCCGGAAGGGCTGAAGAATAAACGTGTGCTGGCGCTC GATATGGGCGCGCTGGTGGCGGGTGCCAAATATCGCGGTGAGTTTGAAGAGCGTCTGAAAGGCGTGTTGAACGACCTGTC CAAACAGGAAGGCAACGTTATTCTCTTTATCGACGAATTGCACACGATGGTCGGTGCCGGCAAGGCAGACGGCGCGATGG ATGCCGGCAATATGCTCAAGCCTGCGCTGGCGCGCGGCGAGTTGCACTGCGTAGGGGCGACGACGCTGGATGAATACCGG CAATACATTGAAAAAGATGCCGCGCTTGAACGTCGTTTCCAGAAAGTGTTTGTCGCCGAACCGACCGTTGAAGATACCAT CGCTATTCTGCGCGGTCTGAAAGAGCGCTATGAGCTGCACCATCACGTGCAAATCACCGATCCGGCGATTGTCGCGGCGG CCATGCTATCGCACCGCTACATTTCCGATCGGAAATTGCCGGATAAAGCGATCGACCTTATTGACGAAGCCGCATCCAGT ATCCGTATGCAAATTGACTCCAAACCGGAGCCGCTGGACCGCCTTGATCGCCGAATTATCCAACTGAAGCTGGAACAGCA GGCATTGAAGAAAGAGTCTGACGAAGCCAGCCTGAAACGTCTGGAAATTCTGAATGCCGAGCTGGAGCAGAAAGAGCGCG AATACTCAAAACTGGAAGAAGAGTGGAAAGCAGAGAAAGCGTCGCTGACGGGCACTCAAAATATCAAGGCGGCGCTGGAG CAGGCAAAAATTTCCCTGGAACAGGCAAGGCGCCAGGGAGATTTAGGGCGGATGTCGGAATTGCAGTACGGCAAAATTCC TGAACTGGAAAAACAGTTGGCCGCCGCCACACAGGTTGAAGGCAAAACCATGCATCTGCTTCGCAATCGAGTAACAGATG CCGAGATTGCCGAAGTGCTTGCCCGCTGGACCGGTATTCCGGTTTCACGGATGCTGGAAAGCGAGCGGGAAAAACTGTTG CGCATGGAGCAGGAATTGCACCAGCGGGTGATTGGACAGAACGAAGCGGTGGAAGCCGTCGCCAATTCTATTCGCCGCAG CCGCGCCGGGTTGTCGGATCCCAACCGTCCTATCGGATCGTTTCTGTTCCTCGGGCCGACCGGCGTGGGTAAAACTGAAT TGTGCAAAACGCTGGCGTCGTTCCTGTTCGATAGCGATGACGCCATGGTTCGTATTGATATGTCCGAATTCATGGAGAAA CATTCGGTTTCCCGTTTGGTGGGCGCGCCTCCGGGATATGTCGGTTATGAGGAAGGTGGGTATCTGACCGAAGCGGTACG CCGCCGCCCTTATTCCGTCATCCTGTTGGATGAAGTGGAAAAAGCGCACCCTGATGTGTTCAACATTCTACTGCAGGTAT TAGATGATGGTCGCCTGACTGACGGACAAGGCCGCACAGTGGATTTCCGCAACACGGTGGTTATCATGACTTCCAACCTG GGCTCGGATCTGATTCAGGAACGGTTTGGTGAGATGAATTACAACCAGATGCGCGATATGGTGTTGAGTGTCGTCAGCCA TCATTTCTGTCATGAGTTTATCATCTGTATCGACGAGGTTGTGGTATTCCATCCTTTGGGGAAAAGCCATATTACTTCAA TTGCGCAGATTCAGTTGCAGCGGCTCTATAAACGGATGGAAGAGCGCGGCTATACCGTTACGATTTCCGACGCAGCGCTG GAATTGCTCGGTAAATCCGGCTTTGATCCGGTGTACGGGGCCCGGCCGTTGAAACGCGCCATCCAACAGATGATCGAGAA TCCGCTGGCGCAACAGATATTGTCAGGGGCTTTGGTTCCCGGCAAACCGGTTACCCTGGATGCGGATGACGAGGCGATTG TTGTTCGACAGTAA Protein sequence : MRLDRLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLNQEGGTVGPLLTAAGANVSRLKSEIEQAISRLPQVEGTGGD VQPSSELVRTLNICDKLAQKKGDTFISSELFVLAVFESRSALGDLLKNAGATQQNVTQAIEQVRGGQQVNEQSAEDQRQA LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLAL DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLIDEAASS IRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLKRLEILNAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALE QAKISLEQARRQGDLGRMSELQYGKIPELEKQLAAATQVEGKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLESEREKLL RMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGEMNYNQMRDMVLSVVSHHFCHEFIICIDEVVVFHPLGKSHITSIAQIQLQRLYKRMEERGYTVTISDAAL ELLGKSGFDPVYGARPLKRAIQQMIENPLAQQILSGALVPGKPVTLDADDEAIVVRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-100 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-94 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003884201.1 | ClpB protein | VFG2084 | Protein | 9e-102 | 41 |
